Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 SNHG22-203ENST00000617833 660 ntBASIC5.65□□□□□ -1.5
ATP4AP20648 ADAM5-202ENST00000399789 1942 ntBASIC5.65□□□□□ -1.51
ATP4AP20648 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.65□□□□□ -1.51
ATP4AP20648 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATP4AP20648 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATP4AP20648 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATP4AP20648 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATP4AP20648 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATP4AP20648 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
ATP4AP20648 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.64□□□□□ -1.51
ATP4AP20648 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 RN7SKP115-201ENST00000363177 317 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 SMIM11P1-201ENST00000369586 178 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 RNU6-842P-201ENST00000384269 107 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 Y_RNA.518-201ENST00000384552 113 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 Y_RNA.551-201ENST00000384661 102 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AL445529.1-201ENST00000398713 389 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 SNORA77-201ENST00000408716 125 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 UBE2V1P4-201ENST00000425374 344 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 PSMA2P3-201ENST00000429685 675 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AL591704.1-201ENST00000432574 275 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AL121871.1-201ENST00000443413 436 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 FTH1P25-201ENST00000447665 469 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 FTH1P2-201ENST00000466086 412 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.64□□□□□ -1.51
ATP4AP20648 AC011005.2-201ENST00000487324 359 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 AC140172.1-201ENST00000502928 141 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AC083829.1-201ENST00000503756 657 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 SNORA25.11-201ENST00000515935 105 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 Y_RNA.673-201ENST00000516306 88 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 DEFB108D-201ENST00000527787 222 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AC021006.3-201ENST00000530771 192 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.64□□□□□ -1.51
ATP4AP20648 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ATP4AP20648 NF1P5-201ENST00000588287 448 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.64□□□□□ -1.51
ATP4AP20648 SDR42E1P2-201ENST00000614861 481 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 SDR42E1P4-201ENST00000620894 481 ntBASIC5.64□□□□□ -1.51
ATP4AP20648 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.64□□□□□ -1.51
ATP4AP20648 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ATP4AP20648 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.64□□□□□ -1.51
ATP4AP20648 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.64□□□□□ -1.51
ATP4AP20648 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.64□□□□□ -1.51
ATP4AP20648 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATP4AP20648 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP4AP20648 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP4AP20648 MTND5P6-201ENST00000422338 1798 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 Y_RNA.126-201ENST00000363382 111 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 Y_RNA.214-201ENST00000364201 112 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 SNORA23-201ENST00000365128 182 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 RNA5SP223-201ENST00000365174 120 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 RNU6-637P-201ENST00000384050 107 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 SNORA66-201ENST00000384792 133 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 Y_RNA.577-201ENST00000384794 101 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 RNU6-754P-201ENST00000391166 107 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 AC108032.1-201ENST00000416706 207 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.63□□□□□ -1.51
ATP4AP20648 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.63□□□□□ -1.51
ATP4AP20648 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP4AP20648 RPS3AP12-201ENST00000443616 753 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 AC022034.3-201ENST00000471393 478 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
ATP4AP20648 RPL17P19-201ENST00000489069 552 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP4AP20648 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP4AP20648 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP4AP20648 PABPC1P7-201ENST00000413177 1513 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 PCAT14-202ENST00000627127 3935 ntBASIC5.63□□□□□ -1.51
ATP4AP20648 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP4AP20648 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.63□□□□□ -1.51
ATP4AP20648 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATP4AP20648 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.63□□□□□ -1.51
ATP4AP20648 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATP4AP20648 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.62□□□□□ -1.51
ATP4AP20648 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms