Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
XRCC1P18887 AC073325.2-201ENST00000339545 159 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 RNA5SP274-201ENST00000410484 108 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.93□□□□□ -1.94
XRCC1P18887 CCDC58P2-201ENST00000417131 366 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 YPEL5P1-201ENST00000419731 367 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.93□□□□□ -1.94
XRCC1P18887 AL139421.1-201ENST00000423010 169 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AL953862.1-201ENST00000423016 168 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 RPL27AP8-201ENST00000424277 446 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.93□□□□□ -1.94
XRCC1P18887 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.93□□□□□ -1.94
XRCC1P18887 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.93□□□□□ -1.94
XRCC1P18887 SNRPEP4-201ENST00000435815 279 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
XRCC1P18887 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 PTENP1-201ENST00000447117 1215 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.93□□□□□ -1.94
XRCC1P18887 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.93□□□□□ -1.94
XRCC1P18887 RPL31P50-201ENST00000471002 296 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AC108729.1-201ENST00000487812 947 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.93□□□□□ -1.94
XRCC1P18887 AC093677.1-201ENST00000514414 678 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 SNORD59.2-201ENST00000516873 68 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.93□□□□□ -1.94
XRCC1P18887 AC239860.2-201ENST00000525886 270 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
XRCC1P18887 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
XRCC1P18887 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.93□□□□□ -1.94
XRCC1P18887 CYCSP2-201ENST00000558168 301 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AP005205.1-201ENST00000563503 508 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 MTCO3P24-201ENST00000572729 782 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.93□□□□□ -1.94
XRCC1P18887 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.93□□□□□ -1.94
XRCC1P18887 AC006270.3-201ENST00000605967 1036 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AC006213.4-201ENST00000616184 634 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 MIR6733-201ENST00000635723 61 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
XRCC1P18887 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
XRCC1P18887 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
XRCC1P18887 ASNSP3-201ENST00000451989 1306 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.92□□□□□ -1.94
XRCC1P18887 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
XRCC1P18887 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
XRCC1P18887 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
XRCC1P18887 RNU6-851P-201ENST00000384565 107 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 MIR135A2-201ENST00000384854 100 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
XRCC1P18887 RNU6-952P-201ENST00000391164 108 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 RPL23AP29-201ENST00000397284 453 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 RNU2-43P-201ENST00000410306 190 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AL451074.5-201ENST00000415894 435 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 MTCYBP38-201ENST00000417160 1123 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 SETP8-201ENST00000435341 628 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 YWHAZP7-201ENST00000436906 631 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 OR6K5P-201ENST00000447050 945 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.92□□□□□ -1.94
XRCC1P18887 snoU13.8-201ENST00000458890 104 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC117440.1-201ENST00000474107 571 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC104563.1-201ENST00000476147 376 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.92□□□□□ -1.94
XRCC1P18887 VN1R104P-201ENST00000505115 1009 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.92□□□□□ -1.94
XRCC1P18887 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
XRCC1P18887 AP001804.3-201ENST00000525146 880 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.92□□□□□ -1.94
XRCC1P18887 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.92□□□□□ -1.94
XRCC1P18887 EIF4BP1-201ENST00000554881 351 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AL049838.1-201ENST00000563647 981 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 LARP7P3-201ENST00000579888 337 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC013444.2-201ENST00000603317 787 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC011451.2-201ENST00000604303 598 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC006386.1-201ENST00000619436 415 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AC011330.2-201ENST00000621680 635 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 AL022578.1-201ENST00000439330 1433 ntBASIC2.92□□□□□ -1.94
XRCC1P18887 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
XRCC1P18887 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
XRCC1P18887 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
XRCC1P18887 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.91□□□□□ -1.94
XRCC1P18887 RNU6-359P-201ENST00000365466 108 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.91□□□□□ -1.94
XRCC1P18887 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
XRCC1P18887 AL590004.2-201ENST00000404787 371 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 USP9YP33-201ENST00000412220 421 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 ELOCP9-201ENST00000418624 239 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 COTL1P1-201ENST00000422309 375 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC022018.1-201ENST00000430685 241 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.91□□□□□ -1.94
XRCC1P18887 USP9YP35-201ENST00000435696 412 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 COX7BP2-201ENST00000437976 242 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 SNRPEP7-201ENST00000438350 220 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 RAC1P7-201ENST00000445367 377 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.91□□□□□ -1.94
XRCC1P18887 RPL7P18-201ENST00000478965 734 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC083906.5-201ENST00000503722 328 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC097462.2-201ENST00000504623 481 ntBASIC2.91□□□□□ -1.94
XRCC1P18887 AC010587.2-201ENST00000511727 448 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms