Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 Y_RNA.431-201ENST00000384086 102 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 RNU6-1029P-201ENST00000384109 107 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN1P18031 RNU2-29P-201ENST00000410423 189 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 RPL23AP26-201ENST00000412728 464 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN1P18031 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN1P18031 AC092017.2-201ENST00000427600 362 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 SAR1AP4-201ENST00000429225 591 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC005534.2-201ENST00000431047 433 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN1P18031 HMGB1P18-201ENST00000438801 619 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC005094.1-201ENST00000440420 368 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC010655.1-201ENST00000449336 292 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN1P18031 RNU6-333P-201ENST00000459117 107 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC091167.1-201ENST00000492017 396 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN1P18031 AC091885.1-201ENST00000506658 268 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN1P18031 PARP4P3-201ENST00000510265 317 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 RN7SKP122-201ENST00000515923 296 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 RN7SKP234-201ENST00000517173 224 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 RN7SKP256-201ENST00000517201 314 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN1P18031 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN1P18031 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN1P18031 AL352979.3-201ENST00000553515 247 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.6□□□□□ -1.67
PTPN1P18031 RPL21P7-201ENST00000557463 483 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN1P18031 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN1P18031 AC067852.4-201ENST00000590314 478 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AL590392.1-201ENST00000604960 446 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 AC093838.1-201ENST00000613014 469 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN1P18031 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN1P18031 TAB3P1-202ENST00000452645 1634 ntBASIC4.6□□□□□ -1.67
PTPN1P18031 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN1P18031 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PTPN1P18031 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN1P18031 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN1P18031 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN1P18031 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN1P18031 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN1P18031 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PTPN1P18031 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 RNU6-179P-201ENST00000363350 107 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 RNU6-637P-201ENST00000384050 107 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN1P18031 AL356967.1-201ENST00000406305 431 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN1P18031 RNA5SP56-201ENST00000410277 118 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 OR6C66P-201ENST00000414917 930 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN1P18031 AF228730.4-201ENST00000421457 183 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AC018630.2-202ENST00000422992 927 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN1P18031 AL138785.1-201ENST00000425821 331 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AL157831.1-201ENST00000426134 473 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 AL590639.1-201ENST00000456484 337 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN1P18031 RPL23AP11-201ENST00000475260 469 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 AC117522.3-201ENST00000507974 584 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 TTC39CP1-201ENST00000512513 755 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 Y_RNA.665-201ENST00000516177 98 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 RNA5SP49-201ENST00000516450 115 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 Y_RNA.691-201ENST00000516611 103 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 HMGN1P28-201ENST00000521340 364 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 DEFB108D-201ENST00000527787 222 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AP003385.6-201ENST00000531603 374 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 NCAPGP2-201ENST00000557911 754 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN1P18031 MIR4703-201ENST00000577728 79 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 MIR4293-201ENST00000584305 78 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 IPO5P1-202ENST00000600039 287 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AL031176.1-201ENST00000604554 466 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 ARF4P1-201ENST00000605447 541 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.59□□□□□ -1.67
PTPN1P18031 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 PART1_1.1-201ENST00000611761 217 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AC104237.2-201ENST00000612456 443 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 AC068831.8-201ENST00000620171 435 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 MIR3653-201ENST00000625572 110 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN1P18031 OR52H1-202ENST00000641796 1061 ntBASIC4.59□□□□□ -1.67
PTPN1P18031 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN1P18031 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN1P18031 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 AC092435.4-201ENST00000623012 4159 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 RNU5E-6P-201ENST00000365574 115 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 Y_RNA.394-201ENST00000383942 103 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms