Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNA5SP206-201ENST00000516703 121 ntBASIC6.91□□□□□ -1.3
CD44P16070 RNU6-58P-201ENST00000517143 103 ntBASIC6.91□□□□□ -1.3
CD44P16070 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.91□□□□□ -1.3
CD44P16070 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.91□□□□□ -1.3
CD44P16070 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.91□□□□□ -1.3
CD44P16070 SNORD115-40-201ENST00000606510 82 ntBASIC6.91□□□□□ -1.3
CD44P16070 AL450472.3-201ENST00000615578 367 ntBASIC6.91□□□□□ -1.3
CD44P16070 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.91□□□□□ -1.3
CD44P16070 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.91□□□□□ -1.3
CD44P16070 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.91□□□□□ -1.3
CD44P16070 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CD44P16070 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CD44P16070 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CD44P16070 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
CD44P16070 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CD44P16070 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CD44P16070 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CD44P16070 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CD44P16070 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CD44P16070 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
CD44P16070 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CD44P16070 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CD44P16070 UBE2L2-201ENST00000254302 429 ntBASIC6.9□□□□□ -1.3
CD44P16070 Y_RNA.229-201ENST00000364347 113 ntBASIC6.9□□□□□ -1.3
CD44P16070 SNORA43.1-201ENST00000364863 140 ntBASIC6.9□□□□□ -1.3
CD44P16070 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
CD44P16070 AL133388.1-201ENST00000404509 287 ntBASIC6.9□□□□□ -1.3
CD44P16070 NDUFS5P4-201ENST00000412983 318 ntBASIC6.9□□□□□ -1.3
CD44P16070 AC009963.1-201ENST00000417265 157 ntBASIC6.9□□□□□ -1.3
CD44P16070 GSTM5P1-201ENST00000434751 660 ntBASIC6.9□□□□□ -1.3
CD44P16070 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.9□□□□□ -1.3
CD44P16070 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC6.9□□□□□ -1.3
CD44P16070 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.9□□□□□ -1.3
CD44P16070 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.9□□□□□ -1.3
CD44P16070 AC018448.1-201ENST00000552843 316 ntBASIC6.9□□□□□ -1.3
CD44P16070 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.9□□□□□ -1.3
CD44P16070 AC020916.2-201ENST00000591242 360 ntBASIC6.9□□□□□ -1.3
CD44P16070 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.9□□□□□ -1.3
CD44P16070 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.9□□□□□ -1.3
CD44P16070 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CD44P16070 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.9□□□□□ -1.31
CD44P16070 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
CD44P16070 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CD44P16070 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.89□□□□□ -1.31
CD44P16070 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CD44P16070 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.89□□□□□ -1.31
CD44P16070 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.89□□□□□ -1.31
CD44P16070 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 RNU6-1336P-201ENST00000383886 109 ntBASIC6.89□□□□□ -1.31
CD44P16070 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.89□□□□□ -1.31
CD44P16070 EIF1AXP1-201ENST00000419267 435 ntBASIC6.89□□□□□ -1.31
CD44P16070 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.89□□□□□ -1.31
CD44P16070 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.89□□□□□ -1.31
CD44P16070 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC6.89□□□□□ -1.31
CD44P16070 AC015524.1-201ENST00000491585 472 ntBASIC6.89□□□□□ -1.31
CD44P16070 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.89□□□□□ -1.31
CD44P16070 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.89□□□□□ -1.31
CD44P16070 AC026421.1-201ENST00000519101 163 ntBASIC6.89□□□□□ -1.31
CD44P16070 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.89□□□□□ -1.31
CD44P16070 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC6.89□□□□□ -1.31
CD44P16070 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.89□□□□□ -1.31
CD44P16070 MIR5688-201ENST00000580619 83 ntBASIC6.89□□□□□ -1.31
CD44P16070 AC069307.1-201ENST00000602820 447 ntBASIC6.89□□□□□ -1.31
CD44P16070 AC211433.2-201ENST00000608433 387 ntBASIC6.89□□□□□ -1.31
CD44P16070 MALAT1.1-201ENST00000618249 95 ntBASIC6.89□□□□□ -1.31
CD44P16070 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC6.89□□□□□ -1.31
CD44P16070 AL137067.2-201ENST00000621202 131 ntBASIC6.89□□□□□ -1.31
CD44P16070 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CD44P16070 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CD44P16070 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.89□□□□□ -1.31
CD44P16070 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CD44P16070 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CD44P16070 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 AKAP17BP-201ENST00000431706 2719 ntBASIC6.88□□□□□ -1.31
CD44P16070 AC022164.1-201ENST00000568767 2673 ntBASIC6.88□□□□□ -1.31
CD44P16070 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.88□□□□□ -1.31
CD44P16070 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.88□□□□□ -1.31
CD44P16070 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.88□□□□□ -1.31
CD44P16070 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD44P16070 AL121835.1-201ENST00000404250 354 ntBASIC6.88□□□□□ -1.31
CD44P16070 RNU6-710P-201ENST00000410424 105 ntBASIC6.88□□□□□ -1.31
CD44P16070 AL031736.2-201ENST00000426573 787 ntBASIC6.88□□□□□ -1.31
CD44P16070 AC090774.1-201ENST00000435925 246 ntBASIC6.88□□□□□ -1.31
CD44P16070 RPL12P46-201ENST00000436610 195 ntBASIC6.88□□□□□ -1.31
CD44P16070 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.88□□□□□ -1.31
CD44P16070 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms