Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RN7SKP263-201ENST00000411194 309 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 RPS15AP12-201ENST00000419498 388 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 OR1AA1P-201ENST00000419597 916 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 BEND7P1-201ENST00000422058 457 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 RPL21P109-201ENST00000422213 475 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 MTCO2P11-201ENST00000431069 680 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 MRPS10P2-201ENST00000431226 381 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 RPL35AP22-201ENST00000436855 335 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 RNU7-59P-201ENST00000459101 61 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC007182.2-201ENST00000489251 402 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 RNU6-1095P-201ENST00000516148 108 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 FAM92A1P1-201ENST00000528023 890 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 CCNG2P1-201ENST00000549521 1000 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 OR4T1P-201ENST00000554933 911 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 HSPE1P5-201ENST00000561489 272 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AL158211.4-201ENST00000606988 584 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AC093536.2-201ENST00000565257 1406 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 ELF2P3-201ENST00000445099 1506 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DOBP13765 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DOBP13765 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DOBP13765 AL136964.1-201ENST00000622038 2990 ntBASIC3.33□□□□□ -1.88
HLA-DOBP13765 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC073073.2-201ENST00000609827 2578 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 FAM35DP-201ENST00000323387 2712 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 Y_RNA.1-201ENST00000352915 104 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 Y_RNA.9-201ENST00000362354 101 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RNU6-181P-201ENST00000363225 107 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RNY1P12-201ENST00000364251 105 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 Y_RNA.554-201ENST00000384672 102 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AL583834.1-201ENST00000406943 343 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 ELOCP4-201ENST00000420090 333 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC069157.1-201ENST00000421749 137 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RPL7P2-201ENST00000427639 268 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC002486.1-201ENST00000435098 391 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC234775.1-201ENST00000454247 670 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 SNORD108-201ENST00000459332 71 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AL672167.3-201ENST00000465951 960 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC023194.1-201ENST00000493084 308 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RPL7P23-201ENST00000493874 747 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 RN7SKP83-201ENST00000516512 178 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RNU6-798P-201ENST00000516912 103 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RNU6-445P-201ENST00000516949 107 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 RNA5SP337-201ENST00000517007 109 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 HMGN1P28-201ENST00000521340 364 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 AP003072.2-201ENST00000527756 676 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AP000857.1-201ENST00000532151 543 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 MIR5685-201ENST00000579080 79 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 MIR3167-201ENST00000579623 85 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC090616.5-202ENST00000582111 297 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 VN1R85P-201ENST00000601587 426 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AP001429.1-201ENST00000602568 530 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AL606834.2-201ENST00000602954 668 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AL590282.1-201ENST00000610379 1136 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC245517.5-201ENST00000611529 162 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC005344.1-201ENST00000613391 459 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AC004825.2-201ENST00000616634 455 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 LRRC77P-213ENST00000637727 880 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 AP004289.2-201ENST00000444413 1457 ntBASIC3.32□□□□□ -1.88
HLA-DOBP13765 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DOBP13765 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DOBP13765 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms