Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.65□□□□□ -1.83
PCNAP12004 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.65□□□□□ -1.83
PCNAP12004 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.65□□□□□ -1.83
PCNAP12004 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCNAP12004 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCNAP12004 AC092326.2-201ENST00000624772 1561 ntBASIC3.64□□□□□ -1.83
PCNAP12004 OR5J1P-201ENST00000313544 939 ntBASIC3.64□□□□□ -1.83
PCNAP12004 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 RNU6-213P-201ENST00000384051 104 ntBASIC3.64□□□□□ -1.83
PCNAP12004 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.64□□□□□ -1.83
PCNAP12004 BX295541.1-201ENST00000417774 250 ntBASIC3.64□□□□□ -1.83
PCNAP12004 C1DP2-201ENST00000418167 426 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.64□□□□□ -1.83
PCNAP12004 AC007283.2-201ENST00000424739 197 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC004975.1-201ENST00000428733 208 ntBASIC3.64□□□□□ -1.83
PCNAP12004 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.64□□□□□ -1.83
PCNAP12004 AC009961.2-201ENST00000435771 251 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AL662791.1-201ENST00000441992 928 ntBASIC3.64□□□□□ -1.83
PCNAP12004 NANOGNBP1-201ENST00000448444 480 ntBASIC3.64□□□□□ -1.83
PCNAP12004 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 AC004801.2-202ENST00000463559 283 ntBASIC3.64□□□□□ -1.83
PCNAP12004 VN1R105P-201ENST00000486595 910 ntBASIC3.64□□□□□ -1.83
PCNAP12004 RPL23AP55-201ENST00000498163 452 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC138853.1-201ENST00000503549 823 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 MTND2P33-201ENST00000506452 1031 ntBASIC3.64□□□□□ -1.83
PCNAP12004 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 Y_RNA.672-201ENST00000516289 104 ntBASIC3.64□□□□□ -1.83
PCNAP12004 RNA5SP164-201ENST00000516533 110 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 MED28P5-201ENST00000528254 438 ntBASIC3.64□□□□□ -1.83
PCNAP12004 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 OR8R1P-201ENST00000543943 764 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AL391156.1-201ENST00000554965 554 ntBASIC3.64□□□□□ -1.83
PCNAP12004 BNIP3P5-201ENST00000562290 498 ntBASIC3.64□□□□□ -1.83
PCNAP12004 MIR3690-201ENST00000580266 75 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 AC068790.6-201ENST00000602558 258 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC073648.5-201ENST00000603502 305 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC121334.2-201ENST00000605387 271 ntBASIC3.64□□□□□ -1.83
PCNAP12004 RNU6-87P-201ENST00000607561 108 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC007038.2-201ENST00000608095 740 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC013562.2-201ENST00000611632 603 ntBASIC3.64□□□□□ -1.83
PCNAP12004 AC122108.2-201ENST00000611946 526 ntBASIC3.64□□□□□ -1.83
PCNAP12004 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
PCNAP12004 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.64□□□□□ -1.83
PCNAP12004 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCNAP12004 AC015967.1-201ENST00000619893 476 ntBASIC3.64□□□□□ -1.83
PCNAP12004 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.64□□□□□ -1.83
PCNAP12004 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 AL392088.2-201ENST00000637607 285 ntBASIC3.64□□□□□ -1.83
PCNAP12004 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCNAP12004 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.64□□□□□ -1.83
PCNAP12004 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCNAP12004 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCNAP12004 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
PCNAP12004 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
PCNAP12004 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PCNAP12004 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.63□□□□□ -1.83
PCNAP12004 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCNAP12004 RNU5E-1-201ENST00000362477 120 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.63□□□□□ -1.83
PCNAP12004 RPS3AP24-201ENST00000407896 734 ntBASIC3.63□□□□□ -1.83
PCNAP12004 SNORA3.3-201ENST00000408712 125 ntBASIC3.63□□□□□ -1.83
PCNAP12004 RN7SKP285-201ENST00000410137 318 ntBASIC3.63□□□□□ -1.83
PCNAP12004 RAB28P1-201ENST00000411517 641 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.63□□□□□ -1.83
PCNAP12004 AC099677.1-201ENST00000420575 175 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.63□□□□□ -1.83
PCNAP12004 RPL7P2-201ENST00000427639 268 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC010975.2-201ENST00000427781 588 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 NEK4P1-201ENST00000433383 879 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC104850.1-201ENST00000435940 476 ntBASIC3.63□□□□□ -1.83
PCNAP12004 ELOCP30-201ENST00000447108 299 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC135721.1-201ENST00000497954 479 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.63□□□□□ -1.83
PCNAP12004 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 RN7SKP298-201ENST00000515950 94 ntBASIC3.63□□□□□ -1.83
PCNAP12004 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PCNAP12004 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 AC008489.1-201ENST00000524271 483 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCNAP12004 AC018630.1-201ENST00000541376 925 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.63□□□□□ -1.83
PCNAP12004 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 CCNG2P1-201ENST00000549521 1000 ntBASIC3.63□□□□□ -1.83
PCNAP12004 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.63□□□□□ -1.83
PCNAP12004 AC136624.4-201ENST00000573044 370 ntBASIC3.63□□□□□ -1.83
PCNAP12004 MIR4474-201ENST00000579189 78 ntBASIC3.63□□□□□ -1.83
PCNAP12004 MIR3146-201ENST00000580367 79 ntBASIC3.63□□□□□ -1.83
PCNAP12004 ZNF415P1-201ENST00000582279 1166 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC053481.4-201ENST00000583164 216 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms