Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC114781.5-201ENST00000615297 108 ntBASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 API5P2-201ENST00000397055 1498 ntBASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CSB-PGBD3P0DP91 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 MTND5P27-201ENST00000428871 1720 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-552P-201ENST00000362869 119 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-1252P-201ENST00000363054 104 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-238P-201ENST00000363313 106 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-432P-201ENST00000384196 109 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 SNORA70E-201ENST00000384492 135 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 SNORA37-201ENST00000384504 129 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 MIR454-201ENST00000390180 115 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 SNORA48.7-201ENST00000391302 135 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AL606923.1-201ENST00000406616 190 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 GPS2P1-201ENST00000411761 986 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RPL12P18-201ENST00000437175 325 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 HMGB1P12-201ENST00000438594 598 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 NUTF2P3-201ENST00000448540 384 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RPS29P15-201ENST00000458329 171 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RN7SL303P-201ENST00000469773 251 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC092436.1-201ENST00000506450 503 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 RPL39P5-202ENST00000512505 151 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 SNORA25.10-201ENST00000515926 124 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC128657.1-201ENST00000549459 145 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AL161713.1-201ENST00000555538 145 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 MTCO3P23-201ENST00000561363 289 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 PRPF19P1-201ENST00000584766 898 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AL031176.1-201ENST00000604554 466 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC091979.2-201ENST00000607514 214 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 ZYXP1-201ENST00000617638 118 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 AC009643.2-201ENST00000603543 1448 ntBASIC6.25□□□□□ -1.41
CSB-PGBD3P0DP91 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RNA5SP453-201ENST00000362503 119 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 Y_RNA.153-201ENST00000363615 91 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RNA5SP28-201ENST00000363841 119 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-641P-201ENST00000384006 107 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 SNORA70C-201ENST00000384538 135 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-310P-201ENST00000384655 107 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 Z98745.1-201ENST00000402553 494 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AL356387.2-201ENST00000422272 243 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 SKA2P1-201ENST00000425592 390 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 OR2AS1P-201ENST00000427827 319 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 MTATP6P16-201ENST00000434543 526 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RPL35AP22-201ENST00000436855 335 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AC010655.1-201ENST00000449336 292 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RN7SL517P-201ENST00000462240 305 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AC126389.1-201ENST00000477436 290 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AC110794.1-201ENST00000505816 425 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 U2.22-201ENST00000636441 106 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CSB-PGBD3P0DP91 MAPK10-328ENST00000641553 4009 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 SOCS5P3-201ENST00000425115 1576 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC104118.1-201ENST00000607625 1589 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AL031595.2-201ENST00000624215 19071 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AL136164.3-201ENST00000624429 3978 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 MTND5P30-201ENST00000452896 1731 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-263P-201ENST00000363811 107 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 Y_RNA.364-201ENST00000365532 101 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms