Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 RPL21P2-201ENST00000440049 481 ntBASIC3.26□□□□□ -1.89
VIMP08670 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.26□□□□□ -1.89
VIMP08670 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.26□□□□□ -1.89
VIMP08670 FAM103A2P-201ENST00000444122 354 ntBASIC3.26□□□□□ -1.89
VIMP08670 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 OR6K1P-201ENST00000456766 971 ntBASIC3.26□□□□□ -1.89
VIMP08670 RN7SL499P-201ENST00000481141 276 ntBASIC3.26□□□□□ -1.89
VIMP08670 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.26□□□□□ -1.89
VIMP08670 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.26□□□□□ -1.89
VIMP08670 AC068587.4-201ENST00000533893 186 ntBASIC3.26□□□□□ -1.89
VIMP08670 CCNG2P1-201ENST00000549521 1000 ntBASIC3.26□□□□□ -1.89
VIMP08670 SETP2-201ENST00000553886 926 ntBASIC3.26□□□□□ -1.89
VIMP08670 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIMP08670 AL157394.1-201ENST00000562983 1224 ntBASIC3.26□□□□□ -1.89
VIMP08670 AC009094.1-201ENST00000564443 426 ntBASIC3.26□□□□□ -1.89
VIMP08670 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.26□□□□□ -1.89
VIMP08670 AC011260.1-201ENST00000578420 472 ntBASIC3.26□□□□□ -1.89
VIMP08670 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.26□□□□□ -1.89
VIMP08670 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.26□□□□□ -1.89
VIMP08670 AP000811.1-201ENST00000603803 651 ntBASIC3.26□□□□□ -1.89
VIMP08670 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIMP08670 AL136295.6-201ENST00000610486 658 ntBASIC3.26□□□□□ -1.89
VIMP08670 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.26□□□□□ -1.89
VIMP08670 AC009159.2-201ENST00000617603 606 ntBASIC3.26□□□□□ -1.89
VIMP08670 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.26□□□□□ -1.89
VIMP08670 AL356321.1-201ENST00000621360 228 ntBASIC3.26□□□□□ -1.89
VIMP08670 AP002791.1-201ENST00000623291 381 ntBASIC3.26□□□□□ -1.89
VIMP08670 AC017037.3-201ENST00000625016 472 ntBASIC3.26□□□□□ -1.89
VIMP08670 AC019226.1-201ENST00000625666 515 ntBASIC3.26□□□□□ -1.89
VIMP08670 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.26□□□□□ -1.89
VIMP08670 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VIMP08670 AC011460.1-201ENST00000636268 1834 ntBASIC3.26□□□□□ -1.89
VIMP08670 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VIMP08670 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VIMP08670 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.25□□□□□ -1.89
VIMP08670 RNA5SP283-201ENST00000365604 119 ntBASIC3.25□□□□□ -1.89
VIMP08670 MIR141-201ENST00000384975 95 ntBASIC3.25□□□□□ -1.89
VIMP08670 RNU6-1197P-201ENST00000391183 107 ntBASIC3.25□□□□□ -1.89
VIMP08670 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC007066.1-201ENST00000392902 381 ntBASIC3.25□□□□□ -1.89
VIMP08670 MIR1290-201ENST00000408735 78 ntBASIC3.25□□□□□ -1.89
VIMP08670 RNU6-1077P-201ENST00000410506 102 ntBASIC3.25□□□□□ -1.89
VIMP08670 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
VIMP08670 RN7SKP263-201ENST00000411194 309 ntBASIC3.25□□□□□ -1.89
VIMP08670 AL359704.1-201ENST00000411586 781 ntBASIC3.25□□□□□ -1.89
VIMP08670 MTND1P21-201ENST00000412991 285 ntBASIC3.25□□□□□ -1.89
VIMP08670 HMGB1P11-201ENST00000413899 637 ntBASIC3.25□□□□□ -1.89
VIMP08670 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
VIMP08670 USP9YP36-201ENST00000424581 829 ntBASIC3.25□□□□□ -1.89
VIMP08670 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
VIMP08670 AL390023.1-201ENST00000428836 262 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC092573.2-201ENST00000434546 243 ntBASIC3.25□□□□□ -1.89
VIMP08670 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.25□□□□□ -1.89
VIMP08670 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.25□□□□□ -1.89
VIMP08670 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.25□□□□□ -1.89
VIMP08670 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.25□□□□□ -1.89
VIMP08670 AC104472.2-201ENST00000469035 601 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.25□□□□□ -1.89
VIMP08670 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.25□□□□□ -1.89
VIMP08670 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.25□□□□□ -1.89
VIMP08670 AC026402.1-201ENST00000513642 170 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.25□□□□□ -1.89
VIMP08670 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.25□□□□□ -1.89
VIMP08670 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.25□□□□□ -1.89
VIMP08670 AC007991.1-201ENST00000522680 631 ntBASIC3.25□□□□□ -1.89
VIMP08670 CASP1P1-201ENST00000526345 212 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.25□□□□□ -1.89
VIMP08670 AC068313.1-201ENST00000604028 1008 ntBASIC3.25□□□□□ -1.89
VIMP08670 AL590392.1-201ENST00000604960 446 ntBASIC3.25□□□□□ -1.89
VIMP08670 BCRP9-201ENST00000605312 388 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC063944.3-201ENST00000609969 533 ntBASIC3.25□□□□□ -1.89
VIMP08670 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.25□□□□□ -1.89
VIMP08670 MIR6076-201ENST00000617521 113 ntBASIC3.25□□□□□ -1.89
VIMP08670 MIR6758-201ENST00000620653 63 ntBASIC3.25□□□□□ -1.89
VIMP08670 AC006111.3-201ENST00000622137 383 ntBASIC3.25□□□□□ -1.89
VIMP08670 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.25□□□□□ -1.89
VIMP08670 OR4G2P-202ENST00000641004 1759 ntBASIC3.25□□□□□ -1.89
VIMP08670 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VIMP08670 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.25□□□□□ -1.89
VIMP08670 MTND5P33-201ENST00000571250 1450 ntBASIC3.24□□□□□ -1.89
VIMP08670 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VIMP08670 RNU6-660P-201ENST00000364566 109 ntBASIC3.24□□□□□ -1.89
VIMP08670 RNU6-769P-201ENST00000384407 104 ntBASIC3.24□□□□□ -1.89
VIMP08670 MIR514A1-201ENST00000385133 98 ntBASIC3.24□□□□□ -1.89
VIMP08670 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VIMP08670 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.24□□□□□ -1.89
VIMP08670 AC011233.1-201ENST00000422812 283 ntBASIC3.24□□□□□ -1.89
VIMP08670 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.24□□□□□ -1.89
VIMP08670 AC008850.1-201ENST00000427546 362 ntBASIC3.24□□□□□ -1.89
VIMP08670 H2AFZP6-201ENST00000444403 394 ntBASIC3.24□□□□□ -1.89
VIMP08670 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.24□□□□□ -1.89
VIMP08670 TPT1P14-201ENST00000448018 505 ntBASIC3.24□□□□□ -1.89
VIMP08670 AL590664.1-201ENST00000448065 339 ntBASIC3.24□□□□□ -1.89
VIMP08670 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.24□□□□□ -1.89
VIMP08670 AC009220.1-201ENST00000451614 275 ntBASIC3.24□□□□□ -1.89
VIMP08670 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.24□□□□□ -1.89
VIMP08670 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VIMP08670 AC072039.1-201ENST00000477611 581 ntBASIC3.24□□□□□ -1.89
VIMP08670 RPL30P14-201ENST00000482744 348 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms