Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU2-32P-201ENST00000411193 191 ntBASIC0.94□□□□□ -2.26
APOBP04114 RPL21P39-201ENST00000463605 483 ntBASIC0.94□□□□□ -2.26
APOBP04114 MIR514B-201ENST00000516774 80 ntBASIC0.94□□□□□ -2.26
APOBP04114 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.94□□□□□ -2.26
APOBP04114 AC018754.1-201ENST00000607486 925 ntBASIC0.94□□□□□ -2.26
APOBP04114 AC104307.1-201ENST00000616142 196 ntBASIC0.94□□□□□ -2.26
APOBP04114 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
APOBP04114 OR51B8P-201ENST00000449892 769 ntBASIC0.93□□□□□ -2.26
APOBP04114 RPPH1-2P-201ENST00000516688 293 ntBASIC0.93□□□□□ -2.26
APOBP04114 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.93□□□□□ -2.26
APOBP04114 MTATP6P3-201ENST00000581686 676 ntBASIC0.93□□□□□ -2.26
APOBP04114 MTND5P12-201ENST00000502851 1449 ntBASIC0.93□□□□□ -2.26
APOBP04114 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC0.93□□□□□ -2.26
APOBP04114 AL591704.1-201ENST00000432574 275 ntBASIC0.93□□□□□ -2.26
APOBP04114 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
APOBP04114 TPT1P14-201ENST00000448018 505 ntBASIC0.93□□□□□ -2.26
APOBP04114 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 ARL2BPP4-201ENST00000506854 471 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.93□□□□□ -2.26
APOBP04114 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC0.93□□□□□ -2.26
APOBP04114 SNORA51.12-201ENST00000384448 134 ntBASIC0.93□□□□□ -2.26
APOBP04114 RNY1P4-201ENST00000384595 115 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC240504.1-201ENST00000395709 845 ntBASIC0.93□□□□□ -2.26
APOBP04114 RNA5SP38-201ENST00000410750 119 ntBASIC0.93□□□□□ -2.26
APOBP04114 TPMTP3-201ENST00000411928 735 ntBASIC0.93□□□□□ -2.26
APOBP04114 SEC63P1-201ENST00000425785 1258 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 AL353093.1-201ENST00000441292 436 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC0.93□□□□□ -2.26
APOBP04114 MTND4LP22-201ENST00000508209 276 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.93□□□□□ -2.26
APOBP04114 AC010265.1-201ENST00000513509 211 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC107918.3-201ENST00000533272 382 ntBASIC0.93□□□□□ -2.26
APOBP04114 AC084364.2-201ENST00000546924 395 ntBASIC0.93□□□□□ -2.26
APOBP04114 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.93□□□□□ -2.26
APOBP04114 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
APOBP04114 AC068700.1-201ENST00000565862 3754 ntBASIC0.93□□□□□ -2.26
APOBP04114 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC0.93□□□□□ -2.26
APOBP04114 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC0.93□□□□□ -2.26
APOBP04114 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC0.93□□□□□ -2.26
APOBP04114 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
APOBP04114 ZNF271P-202ENST00000465539 1970 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC244033.1-201ENST00000426826 870 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC0.92□□□□□ -2.26
APOBP04114 RPS3AP22-201ENST00000488297 769 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC098799.2-201ENST00000509466 868 ntBASIC0.92□□□□□ -2.26
APOBP04114 SNORA31.24-201ENST00000517232 57 ntBASIC0.92□□□□□ -2.26
APOBP04114 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
APOBP04114 MIR4446-201ENST00000578505 67 ntBASIC0.92□□□□□ -2.26
APOBP04114 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.92□□□□□ -2.26
APOBP04114 NUP58P1-201ENST00000502546 1738 ntBASIC0.92□□□□□ -2.26
APOBP04114 AL033519.2-201ENST00000403958 392 ntBASIC0.92□□□□□ -2.26
APOBP04114 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC0.92□□□□□ -2.26
APOBP04114 MTCYBP12-201ENST00000440559 1134 ntBASIC0.92□□□□□ -2.26
APOBP04114 snoU13.3-201ENST00000459441 104 ntBASIC0.92□□□□□ -2.26
APOBP04114 C1GALT1P2-201ENST00000510813 1104 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.92□□□□□ -2.26
APOBP04114 MTND5P4-201ENST00000514978 288 ntBASIC0.92□□□□□ -2.26
APOBP04114 RPL23AP78-201ENST00000599928 470 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC013444.2-201ENST00000603317 787 ntBASIC0.92□□□□□ -2.26
APOBP04114 BNIP3P4-201ENST00000604946 565 ntBASIC0.92□□□□□ -2.26
APOBP04114 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.92□□□□□ -2.26
APOBP04114 AC025016.1-201ENST00000616746 682 ntBASIC0.92□□□□□ -2.26
APOBP04114 MAPK10-266ENST00000641066 6555 ntBASIC0.92□□□□□ -2.26
APOBP04114 RNU2-37P-201ENST00000410695 177 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.92□□□□□ -2.26
APOBP04114 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC0.92□□□□□ -2.26
APOBP04114 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.92□□□□□ -2.26
APOBP04114 AC089999.1-201ENST00000460336 374 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC073901.1-201ENST00000462471 408 ntBASIC0.92□□□□□ -2.26
APOBP04114 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.92□□□□□ -2.26
APOBP04114 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.92□□□□□ -2.26
APOBP04114 AC092954.1-201ENST00000609121 445 ntBASIC0.92□□□□□ -2.26
APOBP04114 MIR7973-1-201ENST00000614683 76 ntBASIC0.92□□□□□ -2.26
APOBP04114 MTND5P10-201ENST00000603719 1809 ntBASIC0.92□□□□□ -2.26
APOBP04114 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
APOBP04114 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.91□□□□□ -2.26
APOBP04114 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.91□□□□□ -2.26
APOBP04114 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.91□□□□□ -2.26
APOBP04114 AC017099.1-201ENST00000448261 1028 ntBASIC0.91□□□□□ -2.26
APOBP04114 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.91□□□□□ -2.26
APOBP04114 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
APOBP04114 KATNBL1P1-201ENST00000605192 748 ntBASIC0.91□□□□□ -2.26
APOBP04114 MIR502-201ENST00000606349 86 ntBASIC0.91□□□□□ -2.26
APOBP04114 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
APOBP04114 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
APOBP04114 MIRLET7G-201ENST00000362280 84 ntBASIC0.91□□□□□ -2.26
APOBP04114 SNRPGP3-201ENST00000469405 227 ntBASIC0.91□□□□□ -2.26
APOBP04114 AC021146.8-201ENST00000507455 733 ntBASIC0.91□□□□□ -2.26
APOBP04114 MTCO3P44-201ENST00000510977 541 ntBASIC0.91□□□□□ -2.26
APOBP04114 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.91□□□□□ -2.26
APOBP04114 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.91□□□□□ -2.26
APOBP04114 RAD23BP2-201ENST00000416003 1207 ntBASIC0.91□□□□□ -2.26
APOBP04114 AL157827.1-201ENST00000447622 132 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms