Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR52A4P-203ENST00000498233 1014 ntBASIC2.37□□□□□ -2.03
APOEP02649 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.37□□□□□ -2.03
APOEP02649 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.37□□□□□ -2.03
APOEP02649 RNU6-27P-201ENST00000516146 107 ntBASIC2.37□□□□□ -2.03
APOEP02649 RNU6-1095P-201ENST00000516148 108 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.37□□□□□ -2.03
APOEP02649 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.37□□□□□ -2.03
APOEP02649 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.37□□□□□ -2.03
APOEP02649 EEF1B2P4-201ENST00000551398 348 ntBASIC2.37□□□□□ -2.03
APOEP02649 LSM6P2-201ENST00000552208 177 ntBASIC2.37□□□□□ -2.03
APOEP02649 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.37□□□□□ -2.03
APOEP02649 AC103810.1-201ENST00000579873 453 ntBASIC2.37□□□□□ -2.03
APOEP02649 VN1R88P-201ENST00000596787 292 ntBASIC2.37□□□□□ -2.03
APOEP02649 AL020997.3-201ENST00000602843 359 ntBASIC2.37□□□□□ -2.03
APOEP02649 BNIP3P4-201ENST00000604946 565 ntBASIC2.37□□□□□ -2.03
APOEP02649 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.37□□□□□ -2.03
APOEP02649 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.37□□□□□ -2.03
APOEP02649 AC073569.3-201ENST00000619055 682 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC009318.4-201ENST00000620496 486 ntBASIC2.37□□□□□ -2.03
APOEP02649 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
APOEP02649 AC064859.1-201ENST00000624741 174 ntBASIC2.37□□□□□ -2.03
APOEP02649 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOEP02649 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
APOEP02649 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
APOEP02649 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
APOEP02649 AC097714.1-201ENST00000511272 1647 ntBASIC2.36□□□□□ -2.03
APOEP02649 RNU6-173P-201ENST00000364215 104 ntBASIC2.36□□□□□ -2.03
APOEP02649 SNORD115-48-201ENST00000364764 76 ntBASIC2.36□□□□□ -2.03
APOEP02649 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
APOEP02649 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.36□□□□□ -2.03
APOEP02649 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.36□□□□□ -2.03
APOEP02649 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.36□□□□□ -2.03
APOEP02649 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.36□□□□□ -2.03
APOEP02649 AC233981.1-201ENST00000423224 461 ntBASIC2.36□□□□□ -2.03
APOEP02649 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.36□□□□□ -2.03
APOEP02649 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.36□□□□□ -2.03
APOEP02649 RPL23AP23-201ENST00000452590 471 ntBASIC2.36□□□□□ -2.03
APOEP02649 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.36□□□□□ -2.03
APOEP02649 AC113155.1-201ENST00000511141 769 ntBASIC2.36□□□□□ -2.03
APOEP02649 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.36□□□□□ -2.03
APOEP02649 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.36□□□□□ -2.03
APOEP02649 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.36□□□□□ -2.03
APOEP02649 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.36□□□□□ -2.03
APOEP02649 AC090888.1-201ENST00000561335 1141 ntBASIC2.36□□□□□ -2.03
APOEP02649 AC010546.1-201ENST00000569391 485 ntBASIC2.36□□□□□ -2.03
APOEP02649 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOEP02649 AL022099.1-201ENST00000604551 712 ntBASIC2.36□□□□□ -2.03
APOEP02649 AL161629.2-201ENST00000615347 275 ntBASIC2.36□□□□□ -2.03
APOEP02649 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.36□□□□□ -2.03
APOEP02649 AC068880.5-201ENST00000624331 290 ntBASIC2.36□□□□□ -2.03
APOEP02649 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.36□□□□□ -2.03
APOEP02649 Z99496.1-201ENST00000469424 1477 ntBASIC2.36□□□□□ -2.03
APOEP02649 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.36□□□□□ -2.03
APOEP02649 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APOEP02649 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
APOEP02649 RNU6-198P-201ENST00000384258 104 ntBASIC2.35□□□□□ -2.03
APOEP02649 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.35□□□□□ -2.03
APOEP02649 RNU6-77P-201ENST00000410554 91 ntBASIC2.35□□□□□ -2.03
APOEP02649 AL513331.1-201ENST00000411908 397 ntBASIC2.35□□□□□ -2.03
APOEP02649 MTND4P24-201ENST00000424002 397 ntBASIC2.35□□□□□ -2.03
APOEP02649 AL356320.1-201ENST00000429616 163 ntBASIC2.35□□□□□ -2.03
APOEP02649 AC004866.2-201ENST00000438285 481 ntBASIC2.35□□□□□ -2.03
APOEP02649 IPO7P1-201ENST00000442031 636 ntBASIC2.35□□□□□ -2.03
APOEP02649 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.35□□□□□ -2.03
APOEP02649 RPS27P26-201ENST00000494583 239 ntBASIC2.35□□□□□ -2.03
APOEP02649 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.35□□□□□ -2.03
APOEP02649 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.35□□□□□ -2.03
APOEP02649 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.35□□□□□ -2.03
APOEP02649 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
APOEP02649 AC025918.2-201ENST00000558683 763 ntBASIC2.35□□□□□ -2.03
APOEP02649 AMZ2P1-203ENST00000565833 850 ntBASIC2.35□□□□□ -2.03
APOEP02649 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.35□□□□□ -2.03
APOEP02649 OR1M4P-201ENST00000589199 287 ntBASIC2.35□□□□□ -2.03
APOEP02649 RPS15AP11-201ENST00000594193 385 ntBASIC2.35□□□□□ -2.03
APOEP02649 AC012443.1-201ENST00000605605 231 ntBASIC2.35□□□□□ -2.03
APOEP02649 AC112503.2-201ENST00000609005 552 ntBASIC2.35□□□□□ -2.03
APOEP02649 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
APOEP02649 AC091925.2-201ENST00000625059 256 ntBASIC2.35□□□□□ -2.03
APOEP02649 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.35□□□□□ -2.03
APOEP02649 NUP58P1-201ENST00000502546 1738 ntBASIC2.34□□□□□ -2.03
APOEP02649 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.34□□□□□ -2.03
APOEP02649 RNA5SP126-201ENST00000365092 109 ntBASIC2.34□□□□□ -2.03
APOEP02649 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
APOEP02649 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.34□□□□□ -2.03
APOEP02649 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.34□□□□□ -2.03
APOEP02649 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.34□□□□□ -2.03
APOEP02649 ATP5F1P1-201ENST00000433775 569 ntBASIC2.34□□□□□ -2.03
APOEP02649 RPS15AP34-201ENST00000487776 387 ntBASIC2.34□□□□□ -2.03
APOEP02649 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.34□□□□□ -2.03
APOEP02649 OR5BM1P-201ENST00000512021 366 ntBASIC2.34□□□□□ -2.03
APOEP02649 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.34□□□□□ -2.03
APOEP02649 RNU6-416P-201ENST00000516265 103 ntBASIC2.34□□□□□ -2.03
APOEP02649 IGJP1-201ENST00000522682 475 ntBASIC2.34□□□□□ -2.03
APOEP02649 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
APOEP02649 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.34□□□□□ -2.03
APOEP02649 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
APOEP02649 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.34□□□□□ -2.03
APOEP02649 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.34□□□□□ -2.03
APOEP02649 AL136363.1-201ENST00000605349 337 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms