Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.43□□□□□ -2.18
SPTA1P02549 AC103810.1-201ENST00000579873 453 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 AC080078.3-201ENST00000605407 463 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 AC243773.3-201ENST00000613270 256 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 AC091895.1-201ENST00000624494 256 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 MTCO1P6-201ENST00000481192 1384 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 DDX43P2-201ENST00000604753 1354 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 RNU6-1080P-201ENST00000383982 107 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.42□□□□□ -2.18
SPTA1P02549 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.42□□□□□ -2.18
SPTA1P02549 AC006483.1-201ENST00000487308 313 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 RNA5SP309-201ENST00000516670 106 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.42□□□□□ -2.18
SPTA1P02549 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.42□□□□□ -2.18
SPTA1P02549 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.42□□□□□ -2.18
SPTA1P02549 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SPTA1P02549 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 Y_RNA.115-201ENST00000363272 98 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 Y_RNA.274-201ENST00000364714 101 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 USP9YP33-201ENST00000412220 421 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 USP9YP35-201ENST00000435696 412 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 MTND4LP12-201ENST00000448237 295 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 HMGB1P26-201ENST00000452520 628 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 CFTRP1-201ENST00000456646 183 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 RPL7P5-201ENST00000471472 736 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 RPS23P4-201ENST00000487908 423 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.42□□□□□ -2.18
SPTA1P02549 MIR4419B-201ENST00000577260 68 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 AC007229.1-201ENST00000590455 412 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 AL590095.2-201ENST00000604136 117 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.42□□□□□ -2.18
SPTA1P02549 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.42□□□□□ -2.18
SPTA1P02549 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SPTA1P02549 AC007390.1-201ENST00000415722 356 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 ARL5AP3-201ENST00000439327 386 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 USP9YP10-201ENST00000454868 628 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 SUMO2P6-201ENST00000505273 288 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 AC006390.1-201ENST00000508068 283 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 AC023813.2-201ENST00000564321 469 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 RN7SL793P-201ENST00000583259 296 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SPTA1P02549 RMST_6.1-201ENST00000611980 203 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SPTA1P02549 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SPTA1P02549 AC240504.1-201ENST00000395709 845 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 RNU6-603P-201ENST00000411403 107 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 AC234781.2-201ENST00000426370 994 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.41□□□□□ -2.18
SPTA1P02549 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.41□□□□□ -2.18
SPTA1P02549 RPL23AP7-203ENST00000449021 469 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 OR7L1P-201ENST00000456181 380 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.41□□□□□ -2.18
SPTA1P02549 AC068944.2-201ENST00000610373 403 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 AC090970.3-201ENST00000612566 866 ntBASIC1.41□□□□□ -2.18
SPTA1P02549 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
SPTA1P02549 METTL21EP-201ENST00000298105 713 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 MTND4P13-201ENST00000402078 1023 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.4□□□□□ -2.18
SPTA1P02549 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.4□□□□□ -2.18
SPTA1P02549 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SPTA1P02549 MTCYBP45-201ENST00000435243 565 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 AC098799.2-201ENST00000509466 868 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 SNORA31.26-201ENST00000517250 137 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 AC092451.2-201ENST00000538746 658 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 AC092159.4-201ENST00000624944 550 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 AC138649.5-201ENST00000637456 137 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 AC006026.1-201ENST00000444025 1803 ntBASIC1.4□□□□□ -2.18
SPTA1P02549 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SPTA1P02549 Y_RNA.471-201ENST00000384312 102 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTA1P02549 AL445305.1-201ENST00000432577 575 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTA1P02549 AC009961.3-201ENST00000449832 765 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.4□□□□□ -2.19
SPTA1P02549 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.4□□□□□ -2.19
SPTA1P02549 AC024614.2-201ENST00000577584 372 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
SPTA1P02549 AP001029.3-201ENST00000588063 596 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 DUXAP3-201ENST00000603616 594 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 SEPT7P9-203ENST00000604116 343 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 AC024560.3-201ENST00000608482 349 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 XIST_intron.1-201ENST00000619444 68 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 AL158801.5-201ENST00000623123 465 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 AC098679.5-201ENST00000624394 571 ntBASIC1.4□□□□□ -2.19
SPTA1P02549 UBE2L2-201ENST00000254302 429 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTA1P02549 PTP4A1P1-201ENST00000420539 515 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 AC027673.1-201ENST00000456245 405 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 RNA5SP395-201ENST00000516567 118 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 AP000907.2-201ENST00000530827 353 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.39□□□□□ -2.19
SPTA1P02549 XKRY2-202ENST00000623874 1581 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 XKRY-202ENST00000624960 1581 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SPTA1P02549 AL136164.4-201ENST00000625013 2135 ntBASIC1.39□□□□□ -2.19
SPTA1P02549 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms