Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC109583.1-201ENST00000432156 268 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 GOT2P5-201ENST00000433995 546 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 Z74696.2-201ENST00000436514 498 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 RPS24P1-201ENST00000438550 371 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AC122718.1-201ENST00000439448 744 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 SDCBPP1-201ENST00000440192 890 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AL031667.1-201ENST00000440222 725 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.32□□□□□ -1.88
CLPTM1O96005 ATP5C1P1-201ENST00000441945 895 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLPTM1O96005 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AL357552.1-201ENST00000445254 415 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 CDC27P1-201ENST00000445384 715 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 HMGB1P15-201ENST00000453854 435 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 Z82190.1-201ENST00000454534 490 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 SUMO2P2-201ENST00000456482 255 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC091179.1-201ENST00000461606 579 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AP001992.1-205ENST00000462248 379 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 FAM133DP-201ENST00000464802 691 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AP001025.2-201ENST00000490908 477 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AL139099.1-201ENST00000497398 403 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 ARL2BPP4-201ENST00000506854 471 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.32□□□□□ -1.88
CLPTM1O96005 RNU6-27P-201ENST00000516146 107 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AL391156.1-201ENST00000554965 554 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.32□□□□□ -1.88
CLPTM1O96005 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLPTM1O96005 AC092354.2-201ENST00000607786 514 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AC006566.1-201ENST00000608943 513 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AL390240.1-201ENST00000612950 384 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPTM1O96005 AC040168.1-201ENST00000623594 991 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPTM1O96005 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.32□□□□□ -1.88
CLPTM1O96005 PABPC1P7-201ENST00000413177 1513 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AP001350.1-201ENST00000601906 1524 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLPTM1O96005 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AL049780.3-201ENST00000624612 1583 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 Y_RNA.234-201ENST00000364409 97 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 RNU6-297P-201ENST00000384636 107 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 MIR134-201ENST00000385258 73 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 RPL32P23-201ENST00000397237 405 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.31□□□□□ -1.88
CLPTM1O96005 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPTM1O96005 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPTM1O96005 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPTM1O96005 AC091862.1-201ENST00000438016 1100 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 USP9YP12-201ENST00000450481 570 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AL590365.1-201ENST00000450788 243 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.31□□□□□ -1.88
CLPTM1O96005 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 AC104563.1-201ENST00000476147 376 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPTM1O96005 AC010625.1-201ENST00000511296 403 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.31□□□□□ -1.88
CLPTM1O96005 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.31□□□□□ -1.88
CLPTM1O96005 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.31□□□□□ -1.88
CLPTM1O96005 OR4H12P-201ENST00000556269 907 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.31□□□□□ -1.88
CLPTM1O96005 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.31□□□□□ -1.88
CLPTM1O96005 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AC098614.4-201ENST00000607601 462 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AC006329.2-201ENST00000611491 394 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 AL603839.4-201ENST00000624658 1005 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 AL392088.2-201ENST00000637607 285 ntBASIC3.31□□□□□ -1.88
CLPTM1O96005 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLPTM1O96005 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CLPTM1O96005 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLPTM1O96005 AL161781.1-201ENST00000354277 403 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 RNU6-761P-201ENST00000384148 107 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 Y_RNA.517-201ENST00000384551 106 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 Y_RNA.548-201ENST00000384656 105 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 SNORA40.3-201ENST00000390964 122 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms