Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF4O95639 DNAJC19P3-201ENST00000594491 331 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC068620.3-201ENST00000602749 560 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC012669.1-201ENST00000603209 283 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AL137843.1-201ENST00000605078 385 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC026790.2-201ENST00000606282 430 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC124016.2-201ENST00000610058 665 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AL592148.2-201ENST00000612210 372 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AC006249.1-201ENST00000621223 471 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 AL049780.3-201ENST00000624612 1583 ntBASIC2.1□□□□□ -2.07
CPSF4O95639 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.1□□□□□ -2.07
CPSF4O95639 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF4O95639 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4O95639 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF4O95639 RNU1-109P-201ENST00000383960 147 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CPSF4O95639 ARF4P3-201ENST00000397387 509 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 RPS3AP26-201ENST00000398259 784 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AL035405.1-201ENST00000400795 710 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4O95639 RNU6-1077P-201ENST00000410506 102 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 MTATP6P19-201ENST00000413797 659 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC092447.6-201ENST00000414578 210 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 RPS7P9-201ENST00000414704 586 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4O95639 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 C1DP1-201ENST00000426049 402 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC012497.1-201ENST00000429392 575 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.09□□□□□ -2.07
CPSF4O95639 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4O95639 AL445669.2-201ENST00000454425 421 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC104472.2-201ENST00000469035 601 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC109486.1-201ENST00000486833 374 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 BOLA3P3-201ENST00000505182 232 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 KLHL2P1-201ENST00000508691 521 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC107222.1-201ENST00000510899 637 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 AP001646.1-201ENST00000527936 915 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC087897.1-201ENST00000550134 156 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 MTCYBP27-201ENST00000555160 670 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 LARP7P2-201ENST00000575306 125 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC126365.2-201ENST00000580630 379 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF4O95639 BNIP3P22-201ENST00000593399 556 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AL445435.1-201ENST00000604232 665 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AP002802.2-201ENST00000605877 235 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC091946.2-201ENST00000606105 291 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC107294.1-201ENST00000609524 467 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC092574.1-201ENST00000609771 420 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AL110115.1-201ENST00000614396 364 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC092650.2-201ENST00000619984 902 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC007275.1-201ENST00000621243 671 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC091925.2-201ENST00000625059 256 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF4O95639 AC087821.2-201ENST00000637086 450 ntBASIC2.09□□□□□ -2.07
CPSF4O95639 AC012321.1-201ENST00000561622 1588 ntBASIC2.09□□□□□ -2.08
CPSF4O95639 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CPSF4O95639 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CPSF4O95639 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF4O95639 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 U3.12-201ENST00000364498 214 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 RNU6-707P-201ENST00000364647 95 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 SUGT1P1-201ENST00000379514 476 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 CD24P4-201ENST00000382840 243 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 RNU6-1300P-201ENST00000391046 108 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 RNU2-28P-201ENST00000410457 189 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 RNU4-65P-201ENST00000410473 140 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 OR4K6P-201ENST00000416478 897 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF4O95639 PTGES3P1-201ENST00000439531 483 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF4O95639 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF4O95639 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.08□□□□□ -2.08
CPSF4O95639 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 GTF2IP9-201ENST00000502460 301 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AC096751.1-202ENST00000502691 1067 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 RNU6-27P-201ENST00000516146 107 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AC008127.2-201ENST00000549925 1075 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 EEF1B2P4-201ENST00000551398 348 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.08□□□□□ -2.08
CPSF4O95639 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF4O95639 AC090695.1-201ENST00000561269 1222 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 AC104072.1-201ENST00000568817 668 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AL390838.2-201ENST00000602394 274 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms