Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCD1O75127 MRPS31P2-201ENST00000451581 518 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC234775.1-201ENST00000454247 670 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCD1O75127 AC091153.1-201ENST00000466297 402 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC090686.1-201ENST00000481577 749 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 RPL23AP55-201ENST00000498163 452 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 RNU6-388P-201ENST00000517012 105 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 RNU6-389P-201ENST00000517048 105 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC090136.1-201ENST00000520009 240 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCD1O75127 CYCSP40-201ENST00000575927 294 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 RN7SL176P-201ENST00000580352 264 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 AL031176.1-201ENST00000604554 466 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC022893.3-201ENST00000607665 437 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 AL357559.1-201ENST00000622228 274 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCD1O75127 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCD1O75127 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCD1O75127 Z95331.1-201ENST00000623075 23112 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC121333.1-201ENST00000567488 2709 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCD1O75127 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD1O75127 TPTE2P4-201ENST00000258589 1605 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCD1O75127 AL445487.1-201ENST00000415694 1580 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD1O75127 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD1O75127 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD1O75127 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.85□□□□□ -1.47
PTCD1O75127 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PTCD1O75127 RNU6-960P-201ENST00000364056 120 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 Y_RNA.493-201ENST00000384422 102 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 Y_RNA.557-201ENST00000384680 107 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 MIR134-201ENST00000385258 73 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 SOD2P1-201ENST00000396543 562 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 U3.35-201ENST00000408405 208 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 RNU6-985P-201ENST00000410182 104 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 POLHP1-201ENST00000411806 470 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 HMGB3P2-201ENST00000411913 584 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 RPL21P24-201ENST00000413752 448 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 MTATP6P29-201ENST00000415057 132 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 CYCSP10-201ENST00000417973 294 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 RPL30P3-201ENST00000424262 333 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 PSMA2P3-201ENST00000429685 675 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 AL160004.2-201ENST00000432935 350 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCD1O75127 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCD1O75127 PPIAP3-201ENST00000450588 505 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 ISCUP1-201ENST00000454451 448 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 BTF3P15-201ENST00000455606 336 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 MTCO3P10-201ENST00000455912 772 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCD1O75127 RNU6-256P-201ENST00000516747 97 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 RNA5SP454-201ENST00000517231 127 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 CR383656.7-201ENST00000548164 174 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 AL161670.1-201ENST00000554348 137 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.85□□□□□ -1.47
PTCD1O75127 AC104662.1-201ENST00000604448 511 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 AC090337.1-201ENST00000579651 2074 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 ZNF33CP-201ENST00000432492 2030 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 AC100778.3-201ENST00000580060 1750 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.85□□□□□ -1.47
PTCD1O75127 ZNF519P1-201ENST00000449011 1626 ntBASIC5.85□□□□□ -1.47
PTCD1O75127 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PTCD1O75127 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 EXOC5P1-201ENST00000510543 1969 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 AL157777.2-201ENST00000258070 137 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCD1O75127 Y_RNA.187-201ENST00000363918 113 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RNU6-550P-201ENST00000391057 101 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RPS12P24-201ENST00000412619 387 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD1O75127 AC104333.2-201ENST00000422630 192 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 AC008065.1-201ENST00000428525 348 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD1O75127 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD1O75127 AC007967.1-201ENST00000455422 1159 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RPL21P8-201ENST00000465083 535 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 UQCRHP4-201ENST00000471686 272 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RPL7P43-201ENST00000478876 753 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCD1O75127 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCD1O75127 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD1O75127 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms