Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 AC114967.1-201ENST00000504890 259 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB2O43679 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB2O43679 AP003497.1-201ENST00000528472 562 ntBASIC3.67□□□□□ -1.82
LDB2O43679 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB2O43679 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.67□□□□□ -1.82
LDB2O43679 AC007424.1-203ENST00000554613 687 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL133241.1-201ENST00000556832 487 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL356432.3-201ENST00000568952 465 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 UBE2L4-201ENST00000587688 464 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB2O43679 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL049634.3-201ENST00000604968 457 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB2O43679 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 AL355472.4-201ENST00000610233 626 ntBASIC3.67□□□□□ -1.82
LDB2O43679 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 C2orf27A-204ENST00000623058 969 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL158801.5-201ENST00000623123 465 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AC040168.1-201ENST00000623594 991 ntBASIC3.67□□□□□ -1.82
LDB2O43679 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 AC012442.3-202ENST00000636742 206 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AC009902.3-201ENST00000606235 2172 ntBASIC3.67□□□□□ -1.82
LDB2O43679 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 MTCO1P24-201ENST00000515438 1558 ntBASIC3.67□□□□□ -1.82
LDB2O43679 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 Y_RNA.248-201ENST00000364501 109 ntBASIC3.66□□□□□ -1.82
LDB2O43679 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
LDB2O43679 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LDB2O43679 Y_RNA.493-201ENST00000384422 102 ntBASIC3.66□□□□□ -1.82
LDB2O43679 RPL23AP32-201ENST00000395315 459 ntBASIC3.66□□□□□ -1.82
LDB2O43679 BTF3P7-201ENST00000407097 488 ntBASIC3.66□□□□□ -1.82
LDB2O43679 RNA5SP56-201ENST00000410277 118 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 RAB9AP3-201ENST00000412737 573 ntBASIC3.66□□□□□ -1.82
LDB2O43679 MTND3P17-201ENST00000416968 344 ntBASIC3.66□□□□□ -1.82
LDB2O43679 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 AC245054.1-201ENST00000420944 258 ntBASIC3.66□□□□□ -1.82
LDB2O43679 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB2O43679 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 AL139415.2-201ENST00000431968 163 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB2O43679 RAB9AP1-201ENST00000449393 573 ntBASIC3.66□□□□□ -1.82
LDB2O43679 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 SNORD121B-201ENST00000458838 81 ntBASIC3.66□□□□□ -1.82
LDB2O43679 snoU109.4-201ENST00000458953 143 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 UBE2CP3-201ENST00000502715 450 ntBASIC3.66□□□□□ -1.82
LDB2O43679 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB2O43679 TMEM248P1-201ENST00000510579 951 ntBASIC3.66□□□□□ -1.82
LDB2O43679 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB2O43679 RN7SKP116-201ENST00000516902 319 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.66□□□□□ -1.82
LDB2O43679 AP000907.2-201ENST00000530827 353 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AP003385.6-201ENST00000531603 374 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB2O43679 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB2O43679 AL121576.1-201ENST00000556055 276 ntBASIC3.66□□□□□ -1.82
LDB2O43679 MIR4444-1-201ENST00000581696 74 ntBASIC3.66□□□□□ -1.82
LDB2O43679 MIR4444-2-201ENST00000584390 74 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC011816.2-201ENST00000607089 556 ntBASIC3.66□□□□□ -1.82
LDB2O43679 MIR6075-201ENST00000620782 95 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC012150.2-201ENST00000621300 544 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AL732618.1-201ENST00000623251 301 ntBASIC3.66□□□□□ -1.82
LDB2O43679 MIR6863-201ENST00000636112 90 ntBASIC3.66□□□□□ -1.82
LDB2O43679 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB2O43679 AC008725.1-201ENST00000605123 2263 ntBASIC3.66□□□□□ -1.82
LDB2O43679 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
LDB2O43679 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
LDB2O43679 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB2O43679 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB2O43679 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LDB2O43679 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
LDB2O43679 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.65□□□□□ -1.82
LDB2O43679 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.65□□□□□ -1.82
LDB2O43679 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LDB2O43679 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.82
LDB2O43679 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDB2O43679 RNU6-989P-201ENST00000362756 107 ntBASIC3.65□□□□□ -1.83
LDB2O43679 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
LDB2O43679 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
LDB2O43679 RNU6-1103P-201ENST00000384150 107 ntBASIC3.65□□□□□ -1.83
LDB2O43679 RNU6-821P-201ENST00000390995 107 ntBASIC3.65□□□□□ -1.83
LDB2O43679 MTCO3P40-201ENST00000392516 676 ntBASIC3.65□□□□□ -1.83
LDB2O43679 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 CIR1P3-201ENST00000405137 479 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms