Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD6O43541 BX276092.4-201ENST00000452056 248 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 Z82190.1-201ENST00000454534 490 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 MTCO3P20-201ENST00000454926 688 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD6O43541 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AP002812.1-201ENST00000495378 474 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 HMGN1P12-201ENST00000499125 195 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 POU5F1P7-201ENST00000508759 541 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC093809.1-201ENST00000509155 340 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC006499.2-201ENST00000513470 337 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD6O43541 AF279873.1-201ENST00000523393 313 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD6O43541 AC068587.4-201ENST00000533893 186 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RPL21P5-201ENST00000554662 472 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AL157687.1-201ENST00000554853 619 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AL138976.2-201ENST00000563989 694 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 MIR544B-201ENST00000582372 78 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD6O43541 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD6O43541 AC005034.5-201ENST00000604219 466 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC243773.3-201ENST00000613270 256 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD6O43541 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD6O43541 AL445264.1-201ENST00000621719 171 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC010338.1-201ENST00000621823 717 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 OTUD4P1-201ENST00000237841 3067 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 AC090337.1-201ENST00000579651 2074 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD6O43541 MTCO1P24-201ENST00000515438 1558 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 AC006378.2-201ENST00000623178 2476 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 ZNF680P1-201ENST00000436625 1469 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 FARSBP1-201ENST00000435808 1778 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 RNA5SP51-201ENST00000364750 119 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 SNORA5A-201ENST00000384111 134 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 Y_RNA.509-201ENST00000384506 99 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 Y_RNA.535-201ENST00000384612 99 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AL121972.1-201ENST00000402023 252 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 RPS3AP9-201ENST00000417027 792 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 SYF2P2-201ENST00000417620 583 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AL035423.1-201ENST00000420331 213 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD6O43541 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD6O43541 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD6O43541 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD6O43541 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD6O43541 MTCO1P27-201ENST00000448269 226 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC079448.1-201ENST00000449377 373 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 RBM43P1-201ENST00000476891 1081 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC017015.1-201ENST00000477387 286 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC018710.1-201ENST00000506509 158 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC114786.4-201ENST00000508771 728 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD6O43541 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.79□□□□□ -1.8
SMAD6O43541 AC008562.1-201ENST00000521763 330 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 OR5AL2P-201ENST00000532185 920 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.79□□□□□ -1.8
SMAD6O43541 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.79□□□□□ -1.8
SMAD6O43541 MIR4444-1-201ENST00000581696 74 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 MIR4444-2-201ENST00000584390 74 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.79□□□□□ -1.8
SMAD6O43541 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AP003122.6-201ENST00000623831 495 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 MIR1321-201ENST00000637766 79 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SMAD6O43541 AC119674.1-207ENST00000641355 633 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.79□□□□□ -1.8
SMAD6O43541 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMAD6O43541 AC027287.1-201ENST00000553115 1453 ntBASIC3.79□□□□□ -1.8
SMAD6O43541 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD6O43541 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SMAD6O43541 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD6O43541 AL512646.1-201ENST00000269395 1077 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 RNU6-251P-201ENST00000363235 104 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 U8.3-201ENST00000363321 132 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 SNORA7.2-201ENST00000364446 145 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SMAD6O43541 MIR23B-201ENST00000384832 97 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 MT-TD-201ENST00000387419 68 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 SNRPEP2-201ENST00000397592 279 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 HLFP1-201ENST00000402375 499 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AL356776.1-201ENST00000406574 447 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD6O43541 AC007390.1-201ENST00000415722 356 ntBASIC3.78□□□□□ -1.8
SMAD6O43541 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms