Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATP2A1O14983 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
ATP2A1O14983 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.73□□□□□ -1.81
ATP2A1O14983 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.73□□□□□ -1.81
ATP2A1O14983 RNU6-1249P-201ENST00000363237 111 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RNU6-501P-201ENST00000364072 100 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RNU4-40P-201ENST00000364351 143 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RNU6-744P-201ENST00000365557 107 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RNU6-1316P-201ENST00000384242 108 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RNU6-328P-201ENST00000390887 106 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AL513174.1-201ENST00000423182 629 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AL512286.1-201ENST00000439244 400 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 MTND1P30-201ENST00000441241 901 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AL353691.1-201ENST00000451332 387 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 snoU13.8-201ENST00000458890 104 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RN7SL863P-201ENST00000462370 296 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RPL7P23-201ENST00000493874 747 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 PCBP2P3-201ENST00000509726 843 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 AC034159.1-201ENST00000513885 583 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.73□□□□□ -1.81
ATP2A1O14983 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.73□□□□□ -1.81
ATP2A1O14983 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATP2A1O14983 uc_338.1-201ENST00000612113 180 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 AC018755.4-201ENST00000619715 454 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.73□□□□□ -1.81
ATP2A1O14983 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
ATP2A1O14983 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATP2A1O14983 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
ATP2A1O14983 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.72□□□□□ -1.81
ATP2A1O14983 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATP2A1O14983 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATP2A1O14983 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATP2A1O14983 GNG5P1-201ENST00000255500 204 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ATP2A1O14983 MTCO1P17-201ENST00000411522 491 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.72□□□□□ -1.81
ATP2A1O14983 RPS27AP14-201ENST00000422868 454 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 RPL21P112-201ENST00000434403 463 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.72□□□□□ -1.81
ATP2A1O14983 AP000542.1-201ENST00000448473 371 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC006539.3-201ENST00000454258 129 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC092754.2-201ENST00000463506 460 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 ST13P14-201ENST00000474095 734 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AP001025.2-201ENST00000490908 477 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 RPL7P47-201ENST00000497299 556 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 AC117522.2-201ENST00000510049 657 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 RNA5SP341-201ENST00000516261 117 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.72□□□□□ -1.81
ATP2A1O14983 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 MIR544B-201ENST00000582372 78 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 AC008507.1-201ENST00000587506 734 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC128687.1-201ENST00000605304 619 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC103710.4-201ENST00000609301 899 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 AC091965.5-201ENST00000624785 342 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.72□□□□□ -1.81
ATP2A1O14983 U6.98-201ENST00000637157 84 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 MIR7153-201ENST00000637758 57 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 CRYM-AS1-204ENST00000637983 556 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATP2A1O14983 ELL2P3-201ENST00000457883 1602 ntBASIC3.72□□□□□ -1.81
ATP2A1O14983 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATP2A1O14983 AL079305.1-201ENST00000623159 3008 ntBASIC3.71□□□□□ -1.81
ATP2A1O14983 MIR422A-201ENST00000362286 90 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 SNORA7.2-201ENST00000364446 145 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 RNU6-335P-201ENST00000364563 113 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 SNORD116-1-201ENST00000384335 95 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 MT-TH-201ENST00000387441 69 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 RPL7P8-201ENST00000411964 730 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AC092447.6-201ENST00000414578 210 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AL365338.1-201ENST00000422282 858 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.71□□□□□ -1.82
ATP2A1O14983 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.71□□□□□ -1.82
ATP2A1O14983 RPL23AP82-202ENST00000427528 469 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP2A1O14983 AL365184.2-201ENST00000431139 435 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP2A1O14983 LARP1BP3-201ENST00000437229 869 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AC118469.1-201ENST00000442943 488 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP2A1O14983 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.71□□□□□ -1.82
ATP2A1O14983 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 RPL36AP33-201ENST00000450395 310 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.71□□□□□ -1.82
ATP2A1O14983 KATNBL1P6-201ENST00000453433 915 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AL122001.1-201ENST00000457027 370 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 CENPBD1P1-201ENST00000464061 469 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 RPS3AP14-201ENST00000483907 780 ntBASIC3.71□□□□□ -1.82
ATP2A1O14983 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms