Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ZNF542P-204ENST00000482727 1305 ntBASIC2.93□□□□□ -1.94
CDX4O14627 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX4O14627 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDX4O14627 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CDX4O14627 SGO1P2-201ENST00000429458 1589 ntBASIC2.93□□□□□ -1.94
CDX4O14627 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX4O14627 AP000526.1-201ENST00000603308 1388 ntBASIC2.93□□□□□ -1.94
CDX4O14627 RNU6-851P-201ENST00000384565 107 ntBASIC2.93□□□□□ -1.94
CDX4O14627 RNU2-15P-201ENST00000410692 191 ntBASIC2.93□□□□□ -1.94
CDX4O14627 RNU4-78P-201ENST00000410940 126 ntBASIC2.93□□□□□ -1.94
CDX4O14627 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX4O14627 MTCO3P12-201ENST00000416718 547 ntBASIC2.93□□□□□ -1.94
CDX4O14627 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX4O14627 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.93□□□□□ -1.94
CDX4O14627 GLRXP1-201ENST00000423261 334 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC234781.2-201ENST00000426370 994 ntBASIC2.93□□□□□ -1.94
CDX4O14627 MYL8P-204ENST00000431574 518 ntBASIC2.93□□□□□ -1.94
CDX4O14627 UBE2D3P4-201ENST00000441973 436 ntBASIC2.93□□□□□ -1.94
CDX4O14627 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX4O14627 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX4O14627 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX4O14627 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX4O14627 Z99127.3-201ENST00000448158 395 ntBASIC2.93□□□□□ -1.94
CDX4O14627 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.93□□□□□ -1.94
CDX4O14627 TRGVB-201ENST00000453257 471 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX4O14627 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX4O14627 AC097493.1-201ENST00000463958 372 ntBASIC2.93□□□□□ -1.94
CDX4O14627 VN1R17P-201ENST00000472048 1090 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CDX4O14627 AC090453.1-201ENST00000495560 436 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX4O14627 AC111000.2-201ENST00000507775 550 ntBASIC2.93□□□□□ -1.94
CDX4O14627 MIR2276-201ENST00000516886 89 ntBASIC2.93□□□□□ -1.94
CDX4O14627 RNU6-1073P-201ENST00000517182 106 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC104986.1-201ENST00000517978 436 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX4O14627 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX4O14627 AC135279.1-201ENST00000543493 504 ntBASIC2.93□□□□□ -1.94
CDX4O14627 EEF1B2P4-201ENST00000551398 348 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.93□□□□□ -1.94
CDX4O14627 AC135628.1-201ENST00000568867 534 ntBASIC2.93□□□□□ -1.94
CDX4O14627 LARP7P2-201ENST00000575306 125 ntBASIC2.93□□□□□ -1.94
CDX4O14627 MIR5047-201ENST00000579212 100 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AP005136.1-201ENST00000579765 429 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.93□□□□□ -1.94
CDX4O14627 SNORD84-203ENST00000584275 78 ntBASIC2.93□□□□□ -1.94
CDX4O14627 MAGOH2P-202ENST00000584384 429 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC110760.3-201ENST00000598794 467 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AF117829.1-206ENST00000621883 3802 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.93□□□□□ -1.94
CDX4O14627 U6.98-201ENST00000637157 84 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC068137.4-201ENST00000638485 296 ntBASIC2.93□□□□□ -1.94
CDX4O14627 AC097714.1-201ENST00000511272 1647 ntBASIC2.93□□□□□ -1.94
CDX4O14627 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
CDX4O14627 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDX4O14627 AL049780.3-201ENST00000624612 1583 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AP001148.1-201ENST00000624124 2359 ntBASIC2.92□□□□□ -1.94
CDX4O14627 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDX4O14627 RNU6-989P-201ENST00000362756 107 ntBASIC2.92□□□□□ -1.94
CDX4O14627 RNU6-629P-201ENST00000384061 103 ntBASIC2.92□□□□□ -1.94
CDX4O14627 RNU6-1181P-201ENST00000384191 106 ntBASIC2.92□□□□□ -1.94
CDX4O14627 RNU6-328P-201ENST00000390887 106 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX4O14627 MTATP6P27-201ENST00000416987 621 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AL365203.2-201ENST00000423444 196 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC019178.2-201ENST00000423595 505 ntBASIC2.92□□□□□ -1.94
CDX4O14627 MTND4P20-201ENST00000424125 869 ntBASIC2.92□□□□□ -1.94
CDX4O14627 RPL21P66-201ENST00000426566 466 ntBASIC2.92□□□□□ -1.94
CDX4O14627 VN1R108P-201ENST00000431580 830 ntBASIC2.92□□□□□ -1.94
CDX4O14627 VDAC1P3-201ENST00000434069 851 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX4O14627 KATNBL1P3-201ENST00000443475 909 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AL513124.1-201ENST00000450410 614 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX4O14627 USP9YP10-201ENST00000454868 628 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AL109741.2-201ENST00000455561 343 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX4O14627 MTCYBP17-201ENST00000503579 789 ntBASIC2.92□□□□□ -1.94
CDX4O14627 RPF2P2-201ENST00000504693 896 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX4O14627 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDX4O14627 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX4O14627 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX4O14627 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX4O14627 RNU6-759P-201ENST00000516740 103 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC105185.1-201ENST00000518705 535 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX4O14627 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX4O14627 AC079600.2-201ENST00000550076 130 ntBASIC2.92□□□□□ -1.94
CDX4O14627 SYF2P1-201ENST00000550658 413 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX4O14627 AC106791.2-201ENST00000604680 391 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC128687.1-201ENST00000605304 619 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC055876.5-201ENST00000605667 259 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC025588.4-201ENST00000615802 908 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC009090.3-201ENST00000616553 565 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX4O14627 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX4O14627 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms