Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SAR1AP4-201ENST00000429225 591 ntBASIC3.75□□□□□ -1.81
CUX2O14529 YWHAZP8-201ENST00000436935 731 ntBASIC3.75□□□□□ -1.81
CUX2O14529 AC015724.1-201ENST00000478577 156 ntBASIC3.75□□□□□ -1.81
CUX2O14529 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CUX2O14529 RNA5SP200-201ENST00000516360 103 ntBASIC3.75□□□□□ -1.81
CUX2O14529 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.75□□□□□ -1.81
CUX2O14529 YWHAQP7-201ENST00000603536 658 ntBASIC3.75□□□□□ -1.81
CUX2O14529 BX248123.2-201ENST00000606318 124 ntBASIC3.75□□□□□ -1.81
CUX2O14529 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.75□□□□□ -1.81
CUX2O14529 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.75□□□□□ -1.81
CUX2O14529 FRG1BP-201ENST00000278882 761 ntBASIC3.74□□□□□ -1.81
CUX2O14529 Y_RNA.191-201ENST00000363972 113 ntBASIC3.74□□□□□ -1.81
CUX2O14529 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.74□□□□□ -1.81
CUX2O14529 AC073264.1-201ENST00000411508 416 ntBASIC3.74□□□□□ -1.81
CUX2O14529 MTATP6P19-201ENST00000413797 659 ntBASIC3.74□□□□□ -1.81
CUX2O14529 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.74□□□□□ -1.81
CUX2O14529 UBE2V1P9-201ENST00000414760 368 ntBASIC3.74□□□□□ -1.81
CUX2O14529 PAICSP7-201ENST00000419829 962 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.74□□□□□ -1.81
CUX2O14529 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.74□□□□□ -1.81
CUX2O14529 AC093392.2-201ENST00000450682 337 ntBASIC3.74□□□□□ -1.81
CUX2O14529 XKRY-201ENST00000510392 1100 ntBASIC3.74□□□□□ -1.81
CUX2O14529 IGLV3-17-201ENST00000519099 244 ntBASIC3.74□□□□□ -1.81
CUX2O14529 HMGB1P41-201ENST00000520234 440 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC104115.2-201ENST00000523026 687 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC004217.3-201ENST00000551552 878 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.74□□□□□ -1.81
CUX2O14529 AC012182.1-201ENST00000570133 895 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.74□□□□□ -1.81
CUX2O14529 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.74□□□□□ -1.81
CUX2O14529 MTATP6P2-201ENST00000603319 678 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC078880.5-201ENST00000617845 421 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AC010872.1-201ENST00000624225 675 ntBASIC3.74□□□□□ -1.81
CUX2O14529 AL356118.1-201ENST00000635272 1078 ntBASIC3.74□□□□□ -1.81
CUX2O14529 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CUX2O14529 AC011978.2-201ENST00000569835 2054 ntBASIC3.74□□□□□ -1.81
CUX2O14529 ZNF849P-201ENST00000594711 1566 ntBASIC3.74□□□□□ -1.81
CUX2O14529 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CUX2O14529 SNORA40.4-201ENST00000390971 128 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AC019070.1-201ENST00000415008 1024 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AL512637.2-201ENST00000431287 1256 ntBASIC3.73□□□□□ -1.81
CUX2O14529 USP9YP7-201ENST00000436723 430 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AL158053.1-201ENST00000441503 453 ntBASIC3.73□□□□□ -1.81
CUX2O14529 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.73□□□□□ -1.81
CUX2O14529 USP9YP32-201ENST00000452432 430 ntBASIC3.73□□□□□ -1.81
CUX2O14529 HMGN3P1-201ENST00000453847 193 ntBASIC3.73□□□□□ -1.81
CUX2O14529 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 RPS27P23-201ENST00000487608 251 ntBASIC3.73□□□□□ -1.81
CUX2O14529 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 NDUFB4P9-201ENST00000511646 388 ntBASIC3.73□□□□□ -1.81
CUX2O14529 RNA5SP182-201ENST00000516064 82 ntBASIC3.73□□□□□ -1.81
CUX2O14529 HIGD1AP6-201ENST00000521833 279 ntBASIC3.73□□□□□ -1.81
CUX2O14529 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.73□□□□□ -1.81
CUX2O14529 AC007536.1-201ENST00000533382 349 ntBASIC3.73□□□□□ -1.81
CUX2O14529 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.73□□□□□ -1.81
CUX2O14529 RPS3AP4-201ENST00000555161 764 ntBASIC3.73□□□□□ -1.81
CUX2O14529 RNA5SP108-201ENST00000605921 117 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AL158211.2-201ENST00000607282 395 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AC120053.1-201ENST00000607706 736 ntBASIC3.73□□□□□ -1.81
CUX2O14529 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CUX2O14529 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.73□□□□□ -1.81
CUX2O14529 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CUX2O14529 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 RNU6-1243P-201ENST00000364028 107 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AC241520.1-201ENST00000422654 1099 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 AC098826.1-201ENST00000433943 471 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 RPL23AP58-201ENST00000440453 469 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AL137159.1-201ENST00000452808 512 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.73□□□□□ -1.81
CUX2O14529 AC080013.2-201ENST00000460866 323 ntBASIC3.73□□□□□ -1.81
CUX2O14529 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 snoZ278.1-201ENST00000517059 112 ntBASIC3.73□□□□□ -1.81
CUX2O14529 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 MIR4789-201ENST00000577469 82 ntBASIC3.73□□□□□ -1.81
CUX2O14529 BPTFP1-201ENST00000579209 492 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.73□□□□□ -1.81
CUX2O14529 RPL21P136-201ENST00000605378 396 ntBASIC3.73□□□□□ -1.81
CUX2O14529 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.73□□□□□ -1.81
CUX2O14529 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CUX2O14529 C2orf27A-204ENST00000623058 969 ntBASIC3.73□□□□□ -1.81
CUX2O14529 XIAPP3-201ENST00000312918 795 ntBASIC3.72□□□□□ -1.81
CUX2O14529 SNORA51.11-201ENST00000384442 131 ntBASIC3.72□□□□□ -1.81
CUX2O14529 RNU1-57P-201ENST00000384491 166 ntBASIC3.72□□□□□ -1.81
CUX2O14529 RNU6-1151P-201ENST00000384684 107 ntBASIC3.72□□□□□ -1.81
CUX2O14529 MIR1250-201ENST00000408098 113 ntBASIC3.72□□□□□ -1.81
CUX2O14529 AL358075.3-201ENST00000426289 226 ntBASIC3.72□□□□□ -1.81
CUX2O14529 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.72□□□□□ -1.81
CUX2O14529 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.72□□□□□ -1.81
CUX2O14529 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms