Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL590365.1-201ENST00000450788 243 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC234775.1-201ENST00000454247 670 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 RPL23AP81-201ENST00000455252 467 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 VN1R105P-201ENST00000486595 910 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 NIPA2P2-201ENST00000496376 1083 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC105252.1-201ENST00000503089 286 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM38O00635 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM38O00635 FTH1P21-201ENST00000512179 511 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 Y_RNA.701-201ENST00000516812 110 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 PAICSP4-201ENST00000517543 1253 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC022878.1-201ENST00000530684 149 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL352979.3-201ENST00000553515 247 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC060771.1-201ENST00000582031 164 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL049634.3-201ENST00000604968 457 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC002553.4-201ENST00000616896 331 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 FRG1KP-201ENST00000623592 341 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM38O00635 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM38O00635 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM38O00635 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM38O00635 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM38O00635 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM38O00635 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM38O00635 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM38O00635 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 Y_RNA.46-201ENST00000362695 102 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 SNORA62.3-201ENST00000365110 153 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM38O00635 Y_RNA.453-201ENST00000384223 109 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 MIR135A2-201ENST00000384854 100 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 MIR670-201ENST00000390142 98 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 RPS20P2-201ENST00000402520 389 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 RNU2-43P-201ENST00000410306 190 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 RN7SKP159-201ENST00000410657 292 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 AF228730.4-201ENST00000421457 183 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AL353777.1-201ENST00000425552 326 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 AL356583.2-201ENST00000426536 280 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 FTH1P6-201ENST00000430768 320 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM38O00635 RPS3AP17-201ENST00000472594 777 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 RN7SL604P-201ENST00000492589 296 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC021146.1-201ENST00000511202 716 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AF131216.2-201ENST00000512316 564 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM38O00635 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM38O00635 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM38O00635 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM38O00635 UBE2V2P2-201ENST00000587677 504 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM38O00635 AP001429.1-201ENST00000602568 530 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 OR10AB1P-201ENST00000609613 938 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC135507.2-201ENST00000612443 309 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC010338.1-201ENST00000621823 717 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 MIR4275-201ENST00000636486 87 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC024614.3-201ENST00000637860 256 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 AC008013.2-202ENST00000637965 364 ntBASIC4.13□□□□□ -1.75
TRIM38O00635 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM38O00635 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM38O00635 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRIM38O00635 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM38O00635 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM38O00635 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM38O00635 Y_RNA.162-201ENST00000363683 102 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 Y_RNA.372-201ENST00000365599 102 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 RNU6-882P-201ENST00000391025 103 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 SNORA3C-201ENST00000408792 125 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 C1DP2-201ENST00000418167 426 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 EIF1P3-201ENST00000423841 334 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM38O00635 AL451062.2-201ENST00000427515 271 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM38O00635 RPL22P17-201ENST00000438729 315 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 RPL23AP89-201ENST00000439324 255 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM38O00635 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM38O00635 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms