Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.63□□□□□ -2.15
CACNA1AO00555 MTND5P9-201ENST00000503854 1755 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 AL445213.1-201ENST00000412589 747 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 AC234781.4-201ENST00000419384 244 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.63□□□□□ -2.15
CACNA1AO00555 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.63□□□□□ -2.15
CACNA1AO00555 CBX3P5-201ENST00000552017 521 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 VN1R74P-201ENST00000613259 503 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 AC010487.4-201ENST00000637027 61 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.63□□□□□ -2.15
CACNA1AO00555 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
CACNA1AO00555 ZNF876P-202ENST00000398732 1485 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 RNU6-1305P-201ENST00000364353 104 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 NEFMP1-201ENST00000443423 1006 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 RNU6-717P-201ENST00000459076 104 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 MTND4LP3-201ENST00000468320 276 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.63□□□□□ -2.15
CACNA1AO00555 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.63□□□□□ -2.15
CACNA1AO00555 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 MIR4644-201ENST00000579929 84 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 RPL23AP78-201ENST00000599928 470 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 AL139286.1-201ENST00000604465 483 ntBASIC1.63□□□□□ -2.15
CACNA1AO00555 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CACNA1AO00555 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.62□□□□□ -2.15
CACNA1AO00555 MTCO3P30-201ENST00000426425 670 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 RPS6P15-201ENST00000431996 751 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AL596276.1-201ENST00000434465 418 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AC016691.1-201ENST00000441321 413 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.62□□□□□ -2.15
CACNA1AO00555 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AL020996.3-201ENST00000606617 222 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AC018690.1-201ENST00000608144 626 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AC022960.2-201ENST00000616300 666 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.62□□□□□ -2.15
CACNA1AO00555 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.62□□□□□ -2.15
CACNA1AO00555 AC025033.1-201ENST00000463883 194 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.62□□□□□ -2.15
CACNA1AO00555 RNU6-826P-201ENST00000516827 104 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 SCARNA1-201ENST00000517138 166 ntBASIC1.62□□□□□ -2.15
CACNA1AO00555 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CACNA1AO00555 AL121972.1-201ENST00000402023 252 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 AL513331.1-201ENST00000411908 397 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 AC110792.2-201ENST00000510278 224 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 AP000907.2-201ENST00000530827 353 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 FO624990.1-201ENST00000636373 85 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 RNU1-23P-201ENST00000363361 144 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 FCF1P2-201ENST00000415284 583 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 RPS15AP36-201ENST00000492022 382 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.61□□□□□ -2.15
CACNA1AO00555 MIR5589-201ENST00000579442 60 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 AL109653.1-201ENST00000603091 248 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 AC002550.2-201ENST00000621246 394 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 MIR7153-201ENST00000637758 57 ntBASIC1.61□□□□□ -2.15
CACNA1AO00555 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CACNA1AO00555 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.6□□□□□ -2.15
CACNA1AO00555 MTND4P23-201ENST00000447723 1363 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 Z82195.2-201ENST00000612348 18351 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 RNU4-31P-201ENST00000384211 141 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 RPL23AP29-201ENST00000397284 453 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 USP9YP8-201ENST00000441913 500 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 SEPT7P3-201ENST00000455017 621 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 AC109464.2-201ENST00000510242 943 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 GAS5-AS1-201ENST00000602767 694 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.6□□□□□ -2.15
CACNA1AO00555 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.6□□□□□ -2.15
CACNA1AO00555 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.6□□□□□ -2.15
CACNA1AO00555 RFPL1S-203ENST00000539579 330 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 AC012119.1-201ENST00000603184 222 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 AP000676.4-201ENST00000624659 623 ntBASIC1.6□□□□□ -2.15
CACNA1AO00555 METTL21EP-201ENST00000298105 713 ntBASIC1.59□□□□□ -2.15
CACNA1AO00555 MIR1183-201ENST00000408856 89 ntBASIC1.59□□□□□ -2.15
CACNA1AO00555 AC093084.1-201ENST00000424233 687 ntBASIC1.59□□□□□ -2.15
CACNA1AO00555 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.59□□□□□ -2.15
CACNA1AO00555 AP003072.2-201ENST00000527756 676 ntBASIC1.59□□□□□ -2.15
CACNA1AO00555 AC091515.1-201ENST00000548110 679 ntBASIC1.59□□□□□ -2.15
CACNA1AO00555 MIR3074-201ENST00000384885 81 ntBASIC1.59□□□□□ -2.16
CACNA1AO00555 SNORA68.2-201ENST00000391263 128 ntBASIC1.59□□□□□ -2.16
CACNA1AO00555 AC119618.1-201ENST00000434191 222 ntBASIC1.59□□□□□ -2.16
CACNA1AO00555 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.59□□□□□ -2.16
CACNA1AO00555 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.59□□□□□ -2.16
CACNA1AO00555 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
CACNA1AO00555 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CACNA1AO00555 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CACNA1AO00555 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CACNA1AO00555 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CACNA1AO00555 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CACNA1AO00555 CYCSP48-201ENST00000417124 323 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 TOMM22P1-201ENST00000418578 312 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 CKS1BP5-201ENST00000434172 273 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 HMGB1P45-201ENST00000435986 653 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 Y_RNA.644-201ENST00000459006 113 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.58□□□□□ -2.16
CACNA1AO00555 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.58□□□□□ -2.16
CACNA1AO00555 AC021146.7-201ENST00000509604 775 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CACNA1AO00555 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.58□□□□□ -2.16
CACNA1AO00555 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CACNA1AO00555 ZNF33CP-201ENST00000432492 2030 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms