Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC109635.4-202ENST00000531666 412 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC018630.1-201ENST00000541376 925 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC136618.2-201ENST00000575091 400 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 MIR3690-201ENST00000580266 75 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC021171.1-201ENST00000603137 706 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC004853.1-201ENST00000604902 698 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC018714.1-201ENST00000605028 208 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC090425.2-201ENST00000608818 501 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 MIR7106-201ENST00000612419 65 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC008147.4-201ENST00000617570 1204 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AL353748.2-201ENST00000622148 471 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC103706.2-201ENST00000638080 240 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 MTND5P27-201ENST00000428871 1720 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NEDD8-MDP1E9PL57 AC087359.1-201ENST00000508335 1740 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL7P26-201ENST00000333817 754 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-28P-201ENST00000362378 107 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC099677.1-201ENST00000420575 175 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL593851.1-201ENST00000426171 157 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL035407.1-201ENST00000429211 571 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 MTND1P20-201ENST00000430341 950 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL7P34-201ENST00000433316 712 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL21P112-201ENST00000434403 463 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL354941.1-201ENST00000438600 464 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL117351.1-201ENST00000438864 766 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC107083.1-201ENST00000439643 279 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 MTCO1P27-201ENST00000448269 226 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC092754.2-201ENST00000463506 460 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC010285.1-201ENST00000470580 392 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC117440.1-201ENST00000474107 571 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL23AP55-201ENST00000498163 452 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC096751.1-202ENST00000502691 1067 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 MTCYBP43-201ENST00000513621 740 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC026407.1-201ENST00000518369 204 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 MTATP6P15-201ENST00000527233 835 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 OR6C7P-201ENST00000547875 934 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 ELOCP32-201ENST00000548625 324 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC106791.2-201ENST00000604680 391 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL033523.1-201ENST00000605153 153 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 AL356585.4-201ENST00000623078 1229 ntBASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NEDD8-MDP1E9PL57 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-289P-201ENST00000364093 107 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 ARPC3P2-201ENST00000457786 533 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 AC091179.1-201ENST00000461606 579 ntBASIC3.1□□□□□ -1.91
NEDD8-MDP1E9PL57 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms