Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC135721.1-201ENST00000497954 479 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC093767.1-201ENST00000504523 156 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AP001804.3-201ENST00000525146 880 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC005730.3-201ENST00000583067 366 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 MIR6734-201ENST00000621166 68 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC010680.1-201ENST00000590024 3590 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 SNORA27.3-201ENST00000364937 134 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 SET-203ENST00000372688 801 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 RNU6-40P-201ENST00000384254 107 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 Z86062.1-201ENST00000406773 777 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AL136133.1-201ENST00000413694 376 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC023050.1-201ENST00000498198 304 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 MTCYBP17-201ENST00000503579 789 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC109471.1-201ENST00000511631 612 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 ZNF192P1-203ENST00000565888 810 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC009314.1-201ENST00000603871 304 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 VN1R74P-201ENST00000613259 503 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AL118556.2-201ENST00000614375 824 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 U6.48-201ENST00000618523 106 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC090617.9-201ENST00000623751 147 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC104820.1-201ENST00000624183 307 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 POLR2J4-204ENST00000418424 324 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC009474.2-201ENST00000451383 136 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC087241.2-201ENST00000535801 324 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 ABI1P1-201ENST00000603375 1120 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC079610.2-201ENST00000604818 690 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 KATNBL1P5-201ENST00000605015 517 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC016877.3-201ENST00000606778 504 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AL137847.3-201ENST00000611521 109 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 SNORD51.1-201ENST00000365405 77 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 SNORD114-22-201ENST00000365423 72 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC017099.1-201ENST00000448261 1028 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC009961.3-201ENST00000449832 765 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AF131216.2-201ENST00000512316 564 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC034268.2-201ENST00000571784 482 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 MIR4458-201ENST00000578872 75 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 PCNAP1-202ENST00000595299 752 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 KATNBL1P1-201ENST00000605192 748 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 AC084824.5-201ENST00000612009 413 ntBASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL6A6A6NMZ7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 MTND4P11-201ENST00000417020 1058 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 RFESDP1-201ENST00000422350 461 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC079804.2-201ENST00000490376 200 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 RNU6-347P-201ENST00000516658 105 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC103987.3-201ENST00000582071 292 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 CBX3P2-202ENST00000583365 535 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 ZNF92P3-201ENST00000596594 954 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AL360085.1-201ENST00000604713 532 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms