Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AL121772.2-201ENST00000614331 297 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC092140.2-201ENST00000618027 521 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 MIR6130-201ENST00000619419 109 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC068831.8-201ENST00000620171 435 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC009878.1-201ENST00000621819 340 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AL159972.1-201ENST00000625150 448 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
LRRC53A6NM62 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC53A6NM62 TAB3P1-202ENST00000452645 1634 ntBASIC3.66□□□□□ -1.82
LRRC53A6NM62 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRRC53A6NM62 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LRRC53A6NM62 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LRRC53A6NM62 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
LRRC53A6NM62 AC009812.4-201ENST00000569134 1805 ntBASIC3.65□□□□□ -1.82
LRRC53A6NM62 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LRRC53A6NM62 AC017071.1-201ENST00000564407 2204 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC53A6NM62 RNU5E-8P-201ENST00000363502 116 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL136372.1-201ENST00000403060 228 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 MTND1P21-201ENST00000412991 285 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL353777.1-201ENST00000425552 326 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 VN1R108P-201ENST00000431580 830 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 ATP5JP1-201ENST00000431631 322 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC024082.2-201ENST00000434771 238 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 CYCSP43-201ENST00000438233 310 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 RPL23AP31-201ENST00000456160 467 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC135721.1-201ENST00000497954 479 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC104619.4-201ENST00000510773 249 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC026801.2-201ENST00000515352 425 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC022447.1-201ENST00000515358 464 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 IGKV2-23-201ENST00000518729 323 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC022616.6-201ENST00000520479 119 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 ZNF192P1-203ENST00000565888 810 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AL356432.3-201ENST00000568952 465 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC012443.1-201ENST00000605605 231 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC087752.4-201ENST00000605911 462 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC006023.2-201ENST00000609916 167 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 MIR6810-201ENST00000622701 70 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC099654.13-201ENST00000639774 207 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.65□□□□□ -1.83
LRRC53A6NM62 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC53A6NM62 AF127577.6-201ENST00000623352 2191 ntBASIC3.65□□□□□ -1.83
LRRC53A6NM62 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LRRC53A6NM62 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL138713.1-201ENST00000624026 2130 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC53A6NM62 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 RNA5SP124-201ENST00000362739 110 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 RN7SKP227-201ENST00000364445 330 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 RNU6-328P-201ENST00000390887 106 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 RNA5SP107-201ENST00000411358 122 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 HMGN1P14-201ENST00000412459 517 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 HMGB3P11-201ENST00000440127 604 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 TXNP1-201ENST00000441872 371 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL022238.1-201ENST00000442557 355 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL592447.1-201ENST00000447592 540 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 RPL7P15-201ENST00000461190 712 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 VN1R17P-201ENST00000472048 1090 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC025518.1-201ENST00000479856 347 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 ACTR3P3-201ENST00000480448 893 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 MTND4P2-201ENST00000507767 1203 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 PAICSP4-201ENST00000517543 1253 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC104027.1-201ENST00000521887 300 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 DEFB108D-201ENST00000527787 222 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AP003181.2-201ENST00000528941 181 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AP003122.4-201ENST00000530980 758 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms