Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 Y_RNA.152-201ENST00000363578 100 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RNU6-960P-201ENST00000364056 120 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RNU6-1078P-201ENST00000364522 103 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RNU6-1062P-201ENST00000383908 107 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 U3.32-201ENST00000408116 212 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RNU2-64P-201ENST00000411315 191 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RPL21P109-201ENST00000422213 475 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC009965.2-201ENST00000425328 970 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AL031736.2-201ENST00000426573 787 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 USP9YP30-201ENST00000430729 455 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC009238.2-201ENST00000431026 355 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC005154.2-201ENST00000438110 379 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RPS29P9-201ENST00000440360 171 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RPL7AP61-201ENST00000443410 636 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 SNORD97-201ENST00000459187 142 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RPL23AP56-201ENST00000460778 453 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC026979.1-201ENST00000492525 396 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RNU6-323P-201ENST00000521915 107 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AP000889.1-201ENST00000530968 660 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC090115.3-201ENST00000553218 849 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AL121576.1-201ENST00000556055 276 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RPL23AP84-201ENST00000571193 464 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 IGHV3-29-201ENST00000604817 344 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 MIR6853-201ENST00000619642 74 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 GABPAP-201ENST00000419271 1356 ntBASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX11Q9Y5W9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 SNORA16.2-201ENST00000390991 127 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 SNORA11-201ENST00000408789 128 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 RNU2-22P-201ENST00000411266 212 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 Z99755.1-201ENST00000414048 380 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 BX510359.2-201ENST00000417920 305 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC243428.1-201ENST00000421099 264 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 MRPS18CP6-201ENST00000423587 223 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 USMG5P1-201ENST00000425964 177 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 RPS15AP10-201ENST00000432472 382 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 RPS23P7-201ENST00000466210 444 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC022034.3-201ENST00000471393 478 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC117503.1-201ENST00000472241 394 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC135721.1-201ENST00000497954 479 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 SNORA14.1-201ENST00000516113 141 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 RNU2-53P-201ENST00000516257 147 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC092470.1-201ENST00000546187 132 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 HMGB3P26-201ENST00000560051 582 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC125232.2-201ENST00000592457 143 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AL355297.3-201ENST00000604082 446 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AC015967.1-201ENST00000619893 476 ntBASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SNX11Q9Y5W9 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX11Q9Y5W9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX11Q9Y5W9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms