Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 EZH2P1-201ENST00000431167 291 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 Z98949.2-201ENST00000440996 144 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 SCARNA18-201ENST00000459004 134 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 Y_RNA.661-201ENST00000516003 99 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 RNU6-189P-201ENST00000516120 101 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 NF1P5-201ENST00000588287 448 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AC068790.4-201ENST00000602474 263 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 ATP1B3P1-201ENST00000605365 821 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AL138726.1-201ENST00000614873 333 ntBASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP3Q9Y3E7 AL672167.1-204ENST00000641875 3017 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC008079.2-201ENST00000623543 20396 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AL136164.3-201ENST00000624429 3978 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 Y_RNA.135-201ENST00000363439 95 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 SET-203ENST00000372688 801 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 Y_RNA.463-201ENST00000384271 102 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 MIR1302-3-201ENST00000408128 138 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 FAR2P2-201ENST00000413041 594 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 RPL30P2-201ENST00000414021 291 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 FAR2P4-202ENST00000425399 584 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AL589765.3-201ENST00000446084 462 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 RPS15AP27-201ENST00000449183 343 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC079168.2-201ENST00000453977 416 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 TBCAP3-201ENST00000512475 312 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 SNORA25.10-201ENST00000515926 124 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AL110118.1-201ENST00000553543 400 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC209154.1-201ENST00000582156 337 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AL354984.3-201ENST00000604803 325 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 AC006157.1-201ENST00000611750 366 ntBASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP3Q9Y3E7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 TPTE2P4-201ENST00000258589 1605 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 MFSD8-216ENST00000641147 4009 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 SNORA75B-201ENST00000384053 137 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 RNY1P14-201ENST00000384426 108 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 U3.29-201ENST00000391296 212 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 PDSS1P1-201ENST00000422953 1114 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC096644.2-201ENST00000429278 159 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 RPL7P28-201ENST00000437739 740 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC005094.1-201ENST00000440420 368 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 RBBP4P6-201ENST00000508098 202 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC097473.1-201ENST00000508142 408 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC108078.2-201ENST00000510750 236 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 RN7SKP92-201ENST00000517266 244 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 RN7SL652P-201ENST00000577769 300 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC012443.1-201ENST00000605605 231 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 FAM157A-202ENST00000615155 405 ntBASIC5.92□□□□□ -1.46
CHMP3Q9Y3E7 AC103705.1-201ENST00000619013 241 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms