Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 RN7SKP104-201ENST00000362605 328 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 Y_RNA.396-201ENST00000383949 103 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 MIR517A-201ENST00000385001 87 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AL590704.1-201ENST00000402856 794 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 HSPE1P8-201ENST00000406997 288 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 RPS27AP12-201ENST00000429552 465 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AL591212.2-201ENST00000433923 257 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 RPL21P2-201ENST00000440049 481 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 EIF4A1P11-201ENST00000451239 222 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 RPL9P32-201ENST00000464118 620 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC009127.1-201ENST00000467090 155 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC114801.2-201ENST00000503825 781 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC004980.4-201ENST00000513375 203 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 RN7SKP234-201ENST00000517173 224 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC008489.1-201ENST00000524271 483 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC087783.2-201ENST00000605070 562 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC020634.1-201ENST00000608701 549 ntBASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.3□□□□□ -1.56
FNDC3AQ9Y2H6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 Y_RNA.39-201ENST00000362620 98 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RNA5SP123-201ENST00000363244 119 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 Y_RNA.210-201ENST00000364161 110 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 Y_RNA.314-201ENST00000365114 102 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 SNORA51.8-201ENST00000384234 132 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 SNORA41-201ENST00000384675 132 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RNU2-3P-201ENST00000410144 191 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RPL21P90-201ENST00000415692 466 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 BX842559.1-201ENST00000419615 532 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 PPP1R11P2-201ENST00000423543 382 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC016712.1-201ENST00000431088 378 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AL645568.3-201ENST00000433683 316 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RPL19P16-201ENST00000433839 588 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RPL12P46-201ENST00000436610 195 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 HSFY6P-201ENST00000445573 403 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RPL22P13-201ENST00000493291 347 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RPS4XP20-201ENST00000505751 772 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC105758.1-201ENST00000506038 399 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC131281.1-201ENST00000522984 164 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC022882.1-201ENST00000532142 501 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC024940.3-201ENST00000538551 316 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC126177.3-201ENST00000551839 688 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC084783.1-201ENST00000565846 910 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC109446.1-201ENST00000566172 220 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 RN7SL290P-201ENST00000578661 300 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AP001029.2-203ENST00000589795 4910 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 AC063976.2-201ENST00000425667 3556 ntBASIC5.29□□□□□ -1.56
FNDC3AQ9Y2H6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FNDC3AQ9Y2H6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FNDC3AQ9Y2H6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms