Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ZNRF3Q9ULT6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 Y_RNA.100-201ENST00000363141 102 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 RNU1-20P-201ENST00000363314 162 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 SNORA63-201ENST00000363450 132 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 Y_RNA.333-201ENST00000365274 102 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 RNU1-63P-201ENST00000383902 164 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 RNU6-1029P-201ENST00000384109 107 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MIR1302-11-201ENST00000408051 138 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MIR1302-9-201ENST00000408365 138 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MIR1302-10-201ENST00000408734 138 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 RNA5SP56-201ENST00000410277 118 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 RNU2-36P-201ENST00000410361 191 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 PPIAP3-201ENST00000450588 505 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 DEFB108D-201ENST00000527787 222 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AC107918.3-201ENST00000533272 382 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MIR5685-201ENST00000579080 79 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MIR4775-201ENST00000581168 75 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AC005498.1-201ENST00000592125 465 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AL606490.9-201ENST00000603331 271 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 RNU6-89P-201ENST00000606519 100 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 MIR1302-2-201ENST00000607096 138 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AL122125.1-201ENST00000616999 600 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 uc_338.11-201ENST00000619132 160 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AC244517.1-201ENST00000606030 2086 ntBASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZNRF3Q9ULT6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 MTND4P14-201ENST00000435799 1354 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 SMG1P4-204ENST00000523028 4131 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 SNORA70E-201ENST00000384492 135 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 MIR514A2-201ENST00000385131 88 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 MIR514A3-201ENST00000385132 88 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AC005517.2-201ENST00000424673 553 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 OR2AH1P-201ENST00000425717 928 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 RPL21P91-201ENST00000429231 479 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 RPL36AP6-201ENST00000435770 321 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AL500522.2-201ENST00000448562 343 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AC091885.1-201ENST00000506658 268 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 MTCO3P9-201ENST00000506989 781 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 RNU4-49P-201ENST00000516080 140 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 PSMA3P-201ENST00000555485 635 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 MIR4742-201ENST00000581069 85 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AC010928.3-201ENST00000587712 541 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 AL160413.1-201ENST00000622780 310 ntBASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ZNRF3Q9ULT6 MAPK10-286ENST00000641208 8747 ntBASIC5.16□□□□□ -1.58
ZNRF3Q9ULT6 AL161912.2-201ENST00000565707 3007 ntBASIC5.16□□□□□ -1.58
ZNRF3Q9ULT6 TAB3P1-202ENST00000452645 1634 ntBASIC5.16□□□□□ -1.58
ZNRF3Q9ULT6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ZNRF3Q9ULT6 Y_RNA.58-201ENST00000362807 102 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms