Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC135776.4-201ENST00000624300 1904 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 SNORA48.7-201ENST00000391302 135 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 MIR1290-201ENST00000408735 78 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 RNU6-193P-201ENST00000410977 107 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC096533.1-201ENST00000411645 353 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AL389915.1-201ENST00000422463 466 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC019178.2-201ENST00000423595 505 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 MTCO2P17-201ENST00000424336 677 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC092393.1-201ENST00000439625 742 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 RNF2P1-201ENST00000442955 1010 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 OR4G11P-201ENST00000492842 939 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC010460.2-201ENST00000509054 677 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 OR4R1P-201ENST00000529879 463 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC044913.1-201ENST00000557200 430 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 MIR4666A-201ENST00000580160 79 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC090616.3-201ENST00000582184 217 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC090330.1-201ENST00000588646 764 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC012468.1-201ENST00000604888 430 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC096577.2-201ENST00000611455 153 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AL442067.2-201ENST00000614033 363 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 AC025588.4-201ENST00000615802 908 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 VN1R7P-201ENST00000619242 903 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 OR5H6-203ENST00000642105 978 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VAPAQ9P0L0 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.37□□□□□ -2.03
VAPAQ9P0L0 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC008669.1-201ENST00000565823 2178 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 RNU1-105P-201ENST00000363470 161 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 MIR325-201ENST00000385260 98 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 RPS3AP24-201ENST00000407896 734 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 MTCYBP15-201ENST00000433123 1127 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AL158053.1-201ENST00000441503 453 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 SEPT14P24-201ENST00000447236 180 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AL109741.2-201ENST00000455561 343 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 RNU6-420P-201ENST00000458780 107 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 MTND4LP3-201ENST00000468320 276 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC078857.1-201ENST00000469870 667 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC011825.1-201ENST00000484967 388 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC023424.2-201ENST00000493479 777 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC080014.1-201ENST00000496877 1201 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 CDC42P4-201ENST00000510507 563 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 RNU1-104P-201ENST00000517280 175 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC023632.1-201ENST00000518463 375 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC068135.2-201ENST00000569293 1028 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 MIR5195-201ENST00000583555 115 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 BNIP3P24-201ENST00000593398 557 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 AC073308.1-201ENST00000623696 305 ntBASIC2.36□□□□□ -2.03
VAPAQ9P0L0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VAPAQ9P0L0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 MAPK10-266ENST00000641066 6555 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 HMGB1P5-201ENST00000255320 642 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 RNU5A-1-201ENST00000362698 116 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 PTGES3P2-201ENST00000407942 482 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AL365496.1-201ENST00000426885 215 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC092017.2-201ENST00000427600 362 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC092427.1-202ENST00000430569 476 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC105272.1-201ENST00000438604 198 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC009237.8-201ENST00000445492 379 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC005297.2-201ENST00000450430 606 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC092155.2-201ENST00000454675 477 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms