Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC010326.1-201ENST00000462726 602 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RPS27AP17-201ENST00000463344 455 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RPL38P4-201ENST00000502376 214 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC018710.1-201ENST00000506509 158 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC026402.1-201ENST00000513642 170 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC008489.1-201ENST00000524271 483 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 CYP4A43P-201ENST00000568156 121 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC005730.3-201ENST00000583067 366 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 BNIP3P30-201ENST00000601184 574 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AL139395.1-201ENST00000603662 160 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AP001521.2-201ENST00000608772 546 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RMST_3.1-201ENST00000611651 109 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AP001486.3-201ENST00000615334 372 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AL589994.2-201ENST00000621124 579 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC025034.2-201ENST00000623264 286 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC024614.3-201ENST00000637860 256 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 NACAP2-201ENST00000318548 624 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 Y_RNA.157-201ENST00000363638 102 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 Y_RNA.160-201ENST00000363677 92 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 MIR513A2-201ENST00000385249 127 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 MIR708-201ENST00000390708 88 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 RNU1-82P-201ENST00000390851 165 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 SNORD37.1-201ENST00000390968 65 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 U3.30-201ENST00000391308 210 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 RNU6-1068P-201ENST00000410958 103 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 RPL21P111-201ENST00000418453 477 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 DUTP6-201ENST00000425573 462 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC004975.1-201ENST00000428733 208 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 RPL26P6-201ENST00000440913 438 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 MTND1P18-201ENST00000448191 573 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC079168.2-201ENST00000453977 416 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 RPL23AP55-201ENST00000498163 452 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC078918.1-201ENST00000498515 228 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC098799.2-201ENST00000509466 868 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC007016.1-201ENST00000512110 244 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 GMPSP1-201ENST00000514075 579 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 RN7SKP122-201ENST00000515923 296 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC109635.4-202ENST00000531666 412 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC133555.2-201ENST00000550213 292 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 MIR4775-201ENST00000581168 75 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 BNIP3P10-201ENST00000605360 577 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC063943.3-201ENST00000615562 356 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AC010133.1-201ENST00000615809 842 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 OR52H1-202ENST00000641796 1061 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 AP001350.1-201ENST00000601906 1524 ntBASIC4.31□□□□□ -1.72
CCM2LQ9NUG4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 AL157700.1-201ENST00000561973 1432 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 AC011266.1-201ENST00000624119 3569 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 SNORD74.4-201ENST00000364129 80 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 U3.22-201ENST00000391120 215 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 RAP1BP3-201ENST00000407180 549 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 RN7SKP100-201ENST00000411258 284 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 RPS23P10-201ENST00000416185 486 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 TOMM22P1-201ENST00000418578 312 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 MTCYBP8-201ENST00000422855 651 ntBASIC4.3□□□□□ -1.72
CCM2LQ9NUG4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms