Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU6-7-201ENST00000364784 107 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 SNORA72.3-201ENST00000365074 132 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 RNU6-8-201ENST00000365467 107 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 TPMTP2-201ENST00000414372 726 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AL137014.1-201ENST00000420490 1226 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 MTCO2P5-201ENST00000422621 426 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 PTENP1-201ENST00000447117 1215 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 RNU7-136P-201ENST00000458819 69 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC097493.1-201ENST00000463958 372 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 H3F3AP1-201ENST00000559984 334 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 MIR4760-201ENST00000585040 80 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AL391001.1-201ENST00000602747 715 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AL022099.1-201ENST00000604551 712 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC008962.1-201ENST00000605729 304 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AL138880.2-201ENST00000616214 239 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC090617.7-201ENST00000623952 126 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 AC090897.3-201ENST00000636973 1157 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.2□□□□□ -1.9
HPS4Q9NQG7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 SNORD67-201ENST00000390833 111 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 RPL23AP29-201ENST00000397284 453 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC006960.1-201ENST00000419980 153 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC108734.1-201ENST00000439549 399 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 SDCBPP1-201ENST00000440192 890 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AL606517.1-201ENST00000446914 387 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 ARPC3P5-201ENST00000448802 534 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 POU5F1P7-201ENST00000508759 541 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC110760.3-202ENST00000515177 371 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 ERHP1-201ENST00000523006 310 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AP001372.4-201ENST00000524889 472 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 DEFB131D-201ENST00000526803 184 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC090695.1-201ENST00000561269 1222 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC034268.2-201ENST00000571784 482 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC022662.1-201ENST00000580252 331 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 MIR4672-201ENST00000583126 81 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 DUXAP11-201ENST00000603858 526 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC004853.1-201ENST00000604902 698 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AL390208.1-201ENST00000605885 644 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AL596245.1-201ENST00000618994 362 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AP000676.4-201ENST00000624659 623 ntBASIC3.19□□□□□ -1.9
HPS4Q9NQG7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPS4Q9NQG7 AP000568.1-201ENST00000282964 442 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 RNU6-28P-201ENST00000362378 107 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 SNORA5B-201ENST00000363786 132 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 RNU6-952P-201ENST00000391164 108 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 MIR1284-201ENST00000408337 120 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 BEND7P1-201ENST00000422058 457 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AL139132.1-201ENST00000431587 344 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 Z99127.3-201ENST00000448158 395 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC104472.2-201ENST00000469035 601 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 RPS29P26-201ENST00000477483 171 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms