Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU4-55P-201ENST00000410731 137 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC245052.5-201ENST00000416320 649 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 MTCYBP24-201ENST00000420387 1106 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 TIMM9P3-201ENST00000428659 274 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 MTND4LP10-201ENST00000435146 291 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC023598.1-201ENST00000472521 361 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 NARSP2-201ENST00000518524 679 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AP001893.2-201ENST00000526949 202 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 SETP2-201ENST00000553886 926 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 SNORA59B-202ENST00000578183 701 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 MIR5685-201ENST00000579080 79 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC060771.1-201ENST00000582031 164 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC055876.5-201ENST00000605667 259 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC006329.2-201ENST00000611491 394 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AL591424.2-201ENST00000617023 128 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC022306.2-201ENST00000617563 647 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 AC091905.1-201ENST00000624400 311 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 MIR3688-2-201ENST00000636963 87 ntBASIC4.03□□□□□ -1.76
USP29Q9HBJ7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP29Q9HBJ7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.03□□□□□ -1.77
USP29Q9HBJ7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
USP29Q9HBJ7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RNU4-12P-201ENST00000365233 139 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RNU6-282P-201ENST00000365357 103 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 U3.15-201ENST00000365398 212 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.372-201ENST00000365599 102 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.450-201ENST00000384198 113 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RNU6-780P-201ENST00000391030 104 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RNU2-8P-201ENST00000410727 190 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC022028.1-201ENST00000412054 408 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC018644.1-201ENST00000429934 551 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC000111.3-201ENST00000433478 193 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 CKS1BP5-201ENST00000434172 273 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RPS29P7-201ENST00000439662 171 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC112653.1-201ENST00000443851 386 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 snoU109.4-201ENST00000458953 143 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC116353.2-201ENST00000505332 712 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC009646.1-201ENST00000510455 318 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RNA5SP179-201ENST00000517284 121 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AK6P1-201ENST00000540219 478 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 SETP7-201ENST00000552169 453 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RPS3AP4-201ENST00000555161 764 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 HSPE1P5-201ENST00000561489 272 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 MIR3167-201ENST00000579623 85 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 MIR4644-201ENST00000579929 84 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AL391646.1-201ENST00000603860 190 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC121334.2-201ENST00000605387 271 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC002550.2-201ENST00000621246 394 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 AC004520.1-201ENST00000608362 1413 ntBASIC4.02□□□□□ -1.77
USP29Q9HBJ7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP29Q9HBJ7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC093908.1-201ENST00000623125 8092 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 RNU6-181P-201ENST00000363225 107 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms