Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AP001350.1-201ENST00000601906 1524 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 MTND4P1-201ENST00000457501 1466 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 MIR454-201ENST00000390180 115 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 U3.20-201ENST00000390909 217 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AL359634.1-202ENST00000404721 284 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 PMCHL1-202ENST00000423102 261 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AL358176.2-201ENST00000425769 204 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 ELOCP18-201ENST00000434209 337 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 MTATP6P16-201ENST00000434543 526 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC108059.2-201ENST00000434626 151 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 RPL32P28-201ENST00000443577 397 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 RPL21P133-201ENST00000443666 476 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 MRPS31P2-201ENST00000451581 518 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 ISCUP1-201ENST00000454451 448 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 RPL7L1P8-201ENST00000469911 741 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 RPL21P126-201ENST00000470049 478 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 HMGB3P16-201ENST00000508037 287 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 PTP4A1P4-201ENST00000512479 322 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.720-201ENST00000517166 92 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC134698.5-201ENST00000519444 336 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 COPS8P3-201ENST00000526024 482 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AP000827.1-201ENST00000527814 258 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 APOOP3-201ENST00000536787 586 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC018630.1-201ENST00000541376 925 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC090615.1-201ENST00000577519 154 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AP005019.3-201ENST00000620418 560 ntBASIC4.77□□□□□ -1.65
RNF38Q9H0F5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RNF38Q9H0F5 AC011460.1-201ENST00000636268 1834 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC004972.1-201ENST00000623934 2209 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNU6-1252P-201ENST00000363054 104 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNU6-641P-201ENST00000384006 107 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.414-201ENST00000384011 101 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNU6-1106P-201ENST00000390845 107 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNU6-903P-201ENST00000391270 109 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 CISD1P1-201ENST00000393907 327 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNA5SP56-201ENST00000410277 118 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNU4-25P-201ENST00000410569 230 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC093156.1-201ENST00000440382 670 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AL031584.1-201ENST00000447169 754 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC107399.1-201ENST00000451226 265 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC011276.1-201ENST00000469688 323 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 RNU6-27P-201ENST00000516146 107 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AP005435.4-201ENST00000529514 284 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AL118558.2-201ENST00000556294 238 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC026951.1-201ENST00000559530 2459 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AL669831.4-202ENST00000590817 238 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AL596245.1-201ENST00000618994 362 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC091925.2-201ENST00000625059 256 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC244517.1-201ENST00000606030 2086 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 AC009951.1-201ENST00000623674 2614 ntBASIC4.76□□□□□ -1.65
RNF38Q9H0F5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AC025031.4-201ENST00000621248 3271 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms