Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 DDX43P2-201ENST00000604753 1354 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RPL21P132-201ENST00000331267 462 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC073325.2-201ENST00000339545 159 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 Y_RNA.169-201ENST00000363745 96 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RNU6-723P-201ENST00000383973 107 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AL138880.1-201ENST00000405824 642 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC092447.6-201ENST00000414578 210 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AL645937.1-202ENST00000421799 937 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RPL7P34-201ENST00000433316 712 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 MTND4LP10-201ENST00000435146 291 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 MTND5P14-201ENST00000441481 1267 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC002381.1-201ENST00000447049 280 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 OR6K5P-201ENST00000447050 945 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 HMGN2P21-201ENST00000447764 270 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AP000873.1-201ENST00000463987 400 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC024589.1-201ENST00000512207 263 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RNU1-41P-201ENST00000516161 162 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 SNORA70.14-201ENST00000516205 110 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RNU1-48P-201ENST00000516400 162 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 MIR2276-201ENST00000516886 89 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 MTND2P38-201ENST00000522536 667 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AP000811.1-201ENST00000603803 651 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC010738.1-201ENST00000604970 987 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC018638.7-201ENST00000605836 1114 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AL390208.1-201ENST00000605885 644 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 AC007671.2-201ENST00000637344 619 ntBASIC3.68□□□□□ -1.82
ZNF541Q9H0D2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 MIR30E-201ENST00000362104 92 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 U3.12-201ENST00000364498 214 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 SNORD51-201ENST00000384320 80 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 RNU2-47P-201ENST00000410649 186 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 NPM1P11-201ENST00000417106 855 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 MTND1P20-201ENST00000430341 950 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 MTND1P26-201ENST00000440488 538 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 RPL7P36-201ENST00000444633 681 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 snoU109.4-201ENST00000458953 143 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC104563.1-201ENST00000476147 376 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC083906.5-201ENST00000503722 328 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 RPF2P2-201ENST00000504693 896 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 MRPS33P3-201ENST00000513456 322 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 MRPS36P5-201ENST00000551909 298 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC072039.2-201ENST00000608883 439 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AL357080.1-201ENST00000617394 239 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AL031667.3-201ENST00000620124 655 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 AC244517.1-201ENST00000606030 2086 ntBASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
ZNF541Q9H0D2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 AC004925.1-201ENST00000624256 2706 ntBASIC3.66□□□□□ -1.82
ZNF541Q9H0D2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms