Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MTCO1P20-201ENST00000425366 358 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 MED13P1-201ENST00000428342 171 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 RPS20P5-201ENST00000434808 360 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 RPL7P54-201ENST00000438336 674 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 HMGN2P21-201ENST00000447764 270 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AL359073.1-201ENST00000448036 403 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 SNRPGP6-201ENST00000451124 220 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 RPL23AP2-201ENST00000471227 466 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 CEACAMP10-202ENST00000495431 496 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 VN1R104P-201ENST00000505115 1009 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC008958.1-201ENST00000511047 682 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC134698.4-201ENST00000523451 826 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC105233.3-201ENST00000531125 744 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC009643.1-201ENST00000532030 391 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 RPS3AP4-201ENST00000555161 764 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC068831.4-201ENST00000556118 109 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 HMGB1P6-201ENST00000569046 646 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 MTCO3P24-201ENST00000572729 782 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 MIR4277-201ENST00000578298 84 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 MIR4293-201ENST00000584305 78 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 IPO5P1-202ENST00000600039 287 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC025449.1-201ENST00000603896 529 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC007621.1-201ENST00000604544 437 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC004067.1-201ENST00000608733 700 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 RMST_9.1-201ENST00000619945 193 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 MIR1321-201ENST00000637766 79 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 MAPK10-373ENST00000641983 6772 ntBASIC4.1□□□□□ -1.75
TRIM54Q9BYV2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC116667.1-201ENST00000604855 2072 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 RNU6-1090P-201ENST00000364065 94 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 SNORA23-201ENST00000365128 182 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 RNU6-1283P-201ENST00000365314 105 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 RNU6-641P-201ENST00000384006 107 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 MIR1-2-201ENST00000384961 85 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 RPS4XP8-201ENST00000402039 771 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 OR2AS1P-201ENST00000427827 319 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 USP9YP7-201ENST00000436723 430 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 BNIP3P2-201ENST00000441221 577 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 RPL21P133-201ENST00000443666 476 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 USP9YP32-201ENST00000452432 430 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 PRDX4P1-201ENST00000507189 574 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 KLHL2P1-201ENST00000508691 521 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 RNU6-840P-201ENST00000517275 65 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 HMGB1P41-201ENST00000520234 440 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 ARL2BPP2-201ENST00000550907 489 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC010928.3-201ENST00000587712 541 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AP001596.2-201ENST00000608410 312 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC064801.1-201ENST00000612025 407 ntBASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM54Q9BYV2 TAB3P1-202ENST00000452645 1634 ntBASIC4.09□□□□□ -1.76
TRIM54Q9BYV2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
TRIM54Q9BYV2 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.76
TRIM54Q9BYV2 AC008725.1-201ENST00000605123 2263 ntBASIC4.09□□□□□ -1.76
TRIM54Q9BYV2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM54Q9BYV2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RNU1-132P-201ENST00000364300 164 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RNA5SP366-201ENST00000365454 123 ntBASIC4.08□□□□□ -1.76
TRIM54Q9BYV2 RNU6-483P-201ENST00000384088 108 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms