Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU6-395P-201ENST00000365662 106 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC245028.2-201ENST00000458673 253 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC103851.1-201ENST00000506833 274 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 RNU2-69P-201ENST00000516061 100 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 HMGB1P19-201ENST00000517578 577 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 IGKV1-32-201ENST00000519290 311 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 ZNF192P1-203ENST00000565888 810 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AL117336.2-201ENST00000602435 335 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 C8orf59P2-201ENST00000603441 271 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 ATP1B3P1-201ENST00000605365 821 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 AC087045.1-201ENST00000605856 382 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 MIR6748-201ENST00000610433 71 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 LARP1BP1-201ENST00000506036 1359 ntBASIC5.53□□□□□ -1.52
TRAIPQ9BWF2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AF117829.1-206ENST00000621883 3802 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 SNORA16.2-201ENST00000390991 127 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AL122016.1-201ENST00000403365 367 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AL356967.1-201ENST00000406305 431 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 TMEM167AP1-201ENST00000423409 219 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 Z80107.2-201ENST00000445127 392 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 RN7SL443P-201ENST00000464331 290 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 DYNLL1P5-201ENST00000467158 270 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 RPL7P5-201ENST00000471472 736 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 TBCAP3-201ENST00000512475 312 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 BTF3P13-201ENST00000513224 490 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC006349.1-201ENST00000555526 235 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 TRAV28-201ENST00000557548 323 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC026464.5-201ENST00000562497 722 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 MIR1273C-201ENST00000578669 77 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 BNIP3P25-201ENST00000596023 559 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AC104237.2-201ENST00000612456 443 ntBASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAIPQ9BWF2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 MUC2-202ENST00000613187 4845 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 RN7SKP115-201ENST00000363177 317 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 U3.12-201ENST00000364498 214 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 SNORA4.3-201ENST00000365564 137 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 Y_RNA.480-201ENST00000384364 102 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 RNU6-831P-201ENST00000384548 107 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 Y_RNA.529-201ENST00000384586 119 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 AL139397.2-201ENST00000404529 772 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 RN7SKP216-201ENST00000411050 312 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 BX323845.1-201ENST00000432417 179 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 UBE2V1P7-201ENST00000446395 340 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 MRPL50P4-201ENST00000446432 475 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 AL121877.1-201ENST00000453704 622 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 snoU13.20-201ENST00000459180 104 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 AC012181.1-201ENST00000479895 423 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 HMGB1P30-201ENST00000492455 606 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 RPL30P5-201ENST00000494923 336 ntBASIC5.51□□□□□ -1.53
TRAIPQ9BWF2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms