Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 NRON-201ENST00000517270 370 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 NARSP2-201ENST00000518524 679 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 ACTR3BP3-201ENST00000565577 979 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC106785.1-201ENST00000565935 262 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 BNIP3P8-201ENST00000597863 560 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AL606490.9-201ENST00000603331 271 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AL391813.2-201ENST00000609113 322 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC108747.1-201ENST00000609508 535 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 BX664608.1-201ENST00000610519 487 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 MIR6875-201ENST00000617506 72 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 MIR6500-201ENST00000622700 86 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC110801.1-201ENST00000623590 212 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AL353746.1-201ENST00000566293 6881 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC092104.1-201ENST00000497346 1441 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC021755.1-201ENST00000559747 1447 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 ELL2P3-201ENST00000457883 1602 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 RNY4P16-201ENST00000364768 94 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AL513331.1-201ENST00000411908 397 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AL451054.2-201ENST00000420896 202 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC244035.1-201ENST00000430042 390 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC093156.1-201ENST00000440382 670 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 CBWD4P-201ENST00000445695 655 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 PDSS1P2-201ENST00000449397 678 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 RPL32P34-201ENST00000486380 400 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC006445.2-201ENST00000510061 472 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 TTC39CP1-201ENST00000512513 755 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 MIR2114-201ENST00000516645 80 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 RNU6-711P-201ENST00000517255 106 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC060788.1-201ENST00000521318 469 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 SNORA62.6-201ENST00000606322 83 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 uc_338.12-201ENST00000616344 181 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 AC108479.2-201ENST00000617314 601 ntBASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERPUD2Q9BSE4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 U3.4-201ENST00000363352 213 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 RNU6-1284P-201ENST00000363701 100 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 U1.1-201ENST00000384101 164 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 RN7SKP56-201ENST00000410513 331 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 RNA5SP38-201ENST00000410750 119 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 SPA17P1-201ENST00000416656 452 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 RPS15AP12-201ENST00000419498 388 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AL159169.1-201ENST00000421119 127 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 USP9YP36-201ENST00000424581 829 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 RPL7P2-201ENST00000427639 268 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 SUMO2P20-201ENST00000520803 283 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AC107934.1-201ENST00000522215 217 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AL121576.1-201ENST00000556055 276 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AC120057.2-201ENST00000571520 271 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 MIR3118-1-201ENST00000581787 76 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AC015726.1-201ENST00000602353 681 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AC079089.3-201ENST00000603094 673 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 Z94722.1-201ENST00000604328 474 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AC092140.2-201ENST00000618027 521 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AC091953.2-201ENST00000623979 160 ntBASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HERPUD2Q9BSE4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms