Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.35□□□□□ -2.19
COL12A1Q99715 AC013470.3-201ENST00000420252 1194 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 TPT1P14-201ENST00000448018 505 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 RPL7P5-201ENST00000471472 736 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.34□□□□□ -2.19
COL12A1Q99715 HMGB3P15-201ENST00000507326 574 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 MTCO3P44-201ENST00000510977 541 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 RNA5SP395-201ENST00000516567 118 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 KATNBL1P1-201ENST00000605192 748 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.34□□□□□ -2.19
COL12A1Q99715 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
COL12A1Q99715 HMGB1P12-201ENST00000438594 598 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 RPL23AP7-203ENST00000449021 469 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC027673.1-201ENST00000456245 405 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 HMGN1P8-201ENST00000463578 288 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC079203.1-201ENST00000487972 404 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC008885.2-201ENST00000509506 930 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.34□□□□□ -2.2
COL12A1Q99715 AC087373.1-201ENST00000524920 491 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
COL12A1Q99715 AC091488.1-201ENST00000604239 660 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC092954.1-201ENST00000609121 445 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL12A1Q99715 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
COL12A1Q99715 Y_RNA.294-201ENST00000364916 102 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 RPL23AP29-201ENST00000397284 453 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.34□□□□□ -2.2
COL12A1Q99715 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.34□□□□□ -2.2
COL12A1Q99715 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL12A1Q99715 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.34□□□□□ -2.2
COL12A1Q99715 AC107015.1-201ENST00000466902 747 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC069528.1-202ENST00000482888 637 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC090071.1-201ENST00000507713 644 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 RNU6-826P-201ENST00000516827 104 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 CR383656.8-201ENST00000549046 145 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.34□□□□□ -2.2
COL12A1Q99715 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 AC138649.5-201ENST00000637456 137 ntBASIC1.34□□□□□ -2.2
COL12A1Q99715 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.33□□□□□ -2.2
COL12A1Q99715 MIR365B-201ENST00000362317 111 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 RNA5SP363-201ENST00000365072 115 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 AC098934.3-201ENST00000430450 190 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.33□□□□□ -2.2
COL12A1Q99715 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.33□□□□□ -2.2
COL12A1Q99715 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL12A1Q99715 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL12A1Q99715 MIR193B-201ENST00000384907 83 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL12A1Q99715 AC240504.1-201ENST00000395709 845 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.33□□□□□ -2.2
COL12A1Q99715 AL357520.1-201ENST00000441557 453 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 NDUFB4P9-201ENST00000511646 388 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.33□□□□□ -2.2
COL12A1Q99715 AC103810.8-201ENST00000607347 118 ntBASIC1.33□□□□□ -2.2
COL12A1Q99715 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
COL12A1Q99715 SNORA16.1-201ENST00000364597 132 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 AC019155.1-201ENST00000382242 574 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.32□□□□□ -2.2
COL12A1Q99715 AC098799.2-201ENST00000509466 868 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 AC024614.2-201ENST00000577584 372 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 MIR3670-2-201ENST00000582974 65 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 MIR3670-1-201ENST00000584160 65 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 MIR3670-3-201ENST00000584855 65 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 MIR3670-4-201ENST00000612260 65 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 AC022513.1-201ENST00000624512 117 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 SNORA79B-201ENST00000410557 148 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 HMGB3P2-201ENST00000411913 584 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.32□□□□□ -2.2
COL12A1Q99715 MTCO1P48-201ENST00000448024 1096 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.32□□□□□ -2.2
COL12A1Q99715 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.32□□□□□ -2.2
COL12A1Q99715 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.32□□□□□ -2.2
COL12A1Q99715 AC008133.2-201ENST00000624540 351 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.32□□□□□ -2.2
COL12A1Q99715 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
COL12A1Q99715 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.32□□□□□ -2.2
COL12A1Q99715 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL12A1Q99715 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL12A1Q99715 HMGB1P5-201ENST00000255320 642 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 U3.15-201ENST00000365398 212 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 SNORA70.7-201ENST00000384159 133 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 MIR216A-201ENST00000385063 110 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 RN7SKP101-201ENST00000411376 320 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 FNDC3CP-201ENST00000420795 1155 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 ARL2BPP4-201ENST00000506854 471 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 AC105313.1-201ENST00000509121 353 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 AC021146.7-201ENST00000509604 775 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 MTND5P4-201ENST00000514978 288 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.31□□□□□ -2.2
COL12A1Q99715 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL12A1Q99715 AL592494.3-201ENST00000609485 464 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 AL033519.2-201ENST00000403958 392 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 RNA5SP239-201ENST00000410218 129 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 USP9YP27-201ENST00000418455 438 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.31□□□□□ -2.2
COL12A1Q99715 CALM1P1-201ENST00000442082 433 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 AL157827.1-201ENST00000447622 132 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 RPPH1-2P-201ENST00000516688 293 ntBASIC1.31□□□□□ -2.2
COL12A1Q99715 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms