Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC112204.3-201ENST00000623822 332 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC009033.1-201ENST00000624279 431 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 MIR1321-201ENST00000637766 79 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 MTND4P12-201ENST00000498999 1377 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 NMD3P1-201ENST00000439704 1488 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 MTND5P33-201ENST00000571250 1450 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AC116667.1-201ENST00000604855 2072 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL122126.1-201ENST00000546905 1318 ntBASIC3.19□□□□□ -1.9
DUX3Q96PT4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC092326.2-201ENST00000624772 1561 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 ELL2P4-201ENST00000446870 1376 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 RNU6-359P-201ENST00000365466 108 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MIR153-1-201ENST00000384914 90 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 ENSAP1-201ENST00000392855 326 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RPL23AP32-201ENST00000395315 459 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RPL32P23-201ENST00000397237 405 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 PPIAP31-201ENST00000405422 495 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MIR1179-201ENST00000408703 91 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 HSPE1P12-201ENST00000412576 301 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC012065.2-201ENST00000421295 375 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RBMY1KP-201ENST00000423480 476 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL353777.1-201ENST00000425552 326 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL691449.1-201ENST00000426570 421 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC006548.1-201ENST00000427470 102 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC133104.1-201ENST00000429100 218 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RPL23AP74-201ENST00000437246 471 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 USP9YP15-201ENST00000442391 422 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC006011.1-201ENST00000442758 349 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 ABCF2P2-201ENST00000450549 296 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 FDX1P2-201ENST00000450769 375 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 RNU7-170P-201ENST00000459303 61 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC022034.3-201ENST00000471393 478 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 PPIAP15-201ENST00000479662 484 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 VN1R105P-201ENST00000486595 910 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC114786.4-201ENST00000508771 728 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 FTH1P21-201ENST00000512179 511 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC046134.1-201ENST00000514454 666 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC104057.1-201ENST00000515547 497 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MIR2114-201ENST00000516645 80 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RNU6-201P-201ENST00000517100 61 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RNU1-45P-201ENST00000517191 141 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC109635.3-201ENST00000529536 185 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC034105.4-201ENST00000568304 277 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC120057.2-201ENST00000571520 271 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MIR4286-201ENST00000580651 93 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MIR3682-201ENST00000581338 84 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL606490.9-201ENST00000603331 271 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL451044.1-201ENST00000604867 238 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC008945.2-201ENST00000606056 604 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 RMST_3.1-201ENST00000611651 109 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 MIR6500-201ENST00000622700 86 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 CR381572.1-201ENST00000625098 102 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 AC024614.3-201ENST00000637860 256 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AP001148.1-201ENST00000624124 2359 ntBASIC3.18□□□□□ -1.9
DUX3Q96PT4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX3Q96PT4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.17□□□□□ -1.9
DUX3Q96PT4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.17□□□□□ -1.9
DUX3Q96PT4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DUX3Q96PT4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
DUX3Q96PT4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
DUX3Q96PT4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DUX3Q96PT4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUX3Q96PT4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUX3Q96PT4 AC138915.3-201ENST00000562908 1389 ntBASIC3.17□□□□□ -1.9
DUX3Q96PT4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DUX3Q96PT4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.17□□□□□ -1.9
DUX3Q96PT4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms