Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 SNORA84-201ENST00000459229 133 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC026410.2-201ENST00000460281 156 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 RN7SL863P-201ENST00000462370 296 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC008155.2-201ENST00000464337 397 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 MTND1P16-201ENST00000465177 898 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 WBP1LP4-201ENST00000505043 344 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 LTV1P1-201ENST00000510683 1237 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC026241.1-201ENST00000517873 2142 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 OR4P1P-201ENST00000530808 1136 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 ZNF321P-202ENST00000550843 495 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC126177.3-201ENST00000551839 688 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AL512347.1-201ENST00000566420 503 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 OR4K7P-201ENST00000580232 945 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AL390838.2-201ENST00000602394 274 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 PRELID3BP8-201ENST00000604148 295 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC021749.1-201ENST00000604322 607 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC025588.2-201ENST00000604851 466 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC243773.3-201ENST00000613270 256 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC025588.4-201ENST00000615802 908 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AP000676.3-201ENST00000623299 569 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC068787.1-201ENST00000623908 691 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC018692.3-201ENST00000623929 123 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC034229.5-201ENST00000624258 185 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC120349.3-201ENST00000624377 529 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 AC011460.1-201ENST00000636268 1834 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00477Q96M19 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
LINC00477Q96M19 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
LINC00477Q96M19 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC009487.2-201ENST00000420969 6821 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00477Q96M19 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00477Q96M19 MIR1284-201ENST00000408337 120 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 VPS26BP1-201ENST00000417155 755 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AL353678.1-201ENST00000422735 741 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AL445669.1-201ENST00000426743 755 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 TXNL1P1-201ENST00000429528 554 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC097713.2-201ENST00000430199 356 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 Z95327.1-201ENST00000446082 482 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 BX322784.1-201ENST00000455793 1077 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 SEM1P1-201ENST00000506694 209 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 RNU6-150P-201ENST00000516237 95 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 DEFB131D-201ENST00000526803 184 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 SNRPGP16-201ENST00000533275 226 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC009094.1-201ENST00000564443 426 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 MIR4637-201ENST00000582405 84 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC010620.2-201ENST00000600135 313 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC100793.4-201ENST00000613683 429 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC021755.4-201ENST00000616620 456 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AL136981.2-201ENST00000617319 734 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AL607023.1-201ENST00000620045 248 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AL353748.2-201ENST00000622148 471 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 CYP3A51P-201ENST00000633513 256 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 MTND2P41-201ENST00000637599 773 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 AC006927.4-201ENST00000639187 543 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms