Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM47Q96LD4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC100757.1-201ENST00000616872 1835 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 SNORD81.1-201ENST00000363064 77 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 RNU1-146P-201ENST00000364015 165 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 SNORA5.1-201ENST00000384275 131 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.497-201ENST00000384447 98 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC079809.1-201ENST00000415468 276 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 RPLP0P7-201ENST00000416050 667 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AP001992.1-205ENST00000462248 379 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 RN7SL809P-201ENST00000482040 297 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 RNA5SP170-201ENST00000517150 101 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC106782.4-201ENST00000568264 210 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AC005520.5-201ENST00000613926 164 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AL591926.8-201ENST00000616876 211 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AL590240.4-201ENST00000616908 390 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 AP000843.1-201ENST00000624880 701 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 BX322639.1-202ENST00000423987 2213 ntBASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM47Q96LD4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.16-201ENST00000362421 102 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AL080315.1-201ENST00000406055 466 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.626-201ENST00000411288 95 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC119751.6-201ENST00000416712 186 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 EI24P4-201ENST00000423683 1078 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC068287.1-201ENST00000430283 295 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 RPL23AP69-201ENST00000431134 458 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 CYCSP34-201ENST00000458172 304 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC092754.1-201ENST00000472975 479 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 RPS23P5-201ENST00000495419 428 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 RNU6-323P-201ENST00000521915 107 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC060771.1-201ENST00000582031 164 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 SNORD39.3-201ENST00000584451 71 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC108738.1-201ENST00000603703 237 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 U2.17-201ENST00000611454 95 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC245517.5-201ENST00000611529 162 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 uc_338.7-201ENST00000621834 124 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 AC055839.1-201ENST00000634467 498 ntBASIC6.06□□□□□ -1.44
TRIM47Q96LD4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM47Q96LD4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC079741.1-201ENST00000321498 212 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.76-201ENST00000362931 109 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 RNA5SP205-201ENST00000364653 136 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 RNU6-550P-201ENST00000391057 101 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 RPL21P109-201ENST00000422213 475 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 BX276092.3-201ENST00000424182 230 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC073264.2-201ENST00000448886 166 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 RPS15AP1-201ENST00000457423 391 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC021205.1-201ENST00000468797 348 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC117503.1-201ENST00000472241 394 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 PDCD5P2-201ENST00000507570 312 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 RN7SKP283-201ENST00000517197 270 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AP006289.1-201ENST00000538089 277 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms