Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC090616.5-202ENST00000582111 297 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 UBE2L4-201ENST00000587688 464 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC091805.2-201ENST00000603848 235 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC013562.2-201ENST00000611632 603 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AP001506.1-201ENST00000615444 211 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC233309.1-201ENST00000619522 751 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AL158801.5-201ENST00000623123 465 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC010149.2-201ENST00000637608 315 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC099654.13-201ENST00000639774 207 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SNX27Q96L92 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX27Q96L92 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX27Q96L92 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
SNX27Q96L92 LINC02471-203ENST00000641941 4752 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 AC011460.1-201ENST00000636268 1834 ntBASIC4.23□□□□□ -1.73
SNX27Q96L92 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 MAPK10-372ENST00000641954 3413 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 AC009902.3-201ENST00000606235 2172 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 U1.1-201ENST00000384101 164 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 RNU6-114P-201ENST00000384704 105 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 MIR30B-201ENST00000384850 88 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 RPS7P15-201ENST00000415804 584 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 SPA17P1-201ENST00000416656 452 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 ATP5C1P1-201ENST00000441945 895 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX27Q96L92 NANOGP10-201ENST00000453325 895 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 RPL31P61-201ENST00000496160 376 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX27Q96L92 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX27Q96L92 CDC42P4-201ENST00000510507 563 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX27Q96L92 RN7SKP298-201ENST00000515950 94 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 SCARNA14-201ENST00000516903 136 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 MTCYBP20-201ENST00000524239 1129 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 AP000907.2-201ENST00000530827 353 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX27Q96L92 AL589743.7-201ENST00000612637 233 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 AC015540.1-201ENST00000615828 501 ntBASIC4.22□□□□□ -1.73
SNX27Q96L92 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX27Q96L92 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX27Q96L92 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX27Q96L92 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
SNX27Q96L92 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SNX27Q96L92 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SNX27Q96L92 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.21□□□□□ -1.73
SNX27Q96L92 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SNX27Q96L92 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX27Q96L92 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX27Q96L92 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX27Q96L92 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SNX27Q96L92 MIR199A2-201ENST00000385289 110 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX27Q96L92 AL139413.1-201ENST00000421309 217 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC244098.2-201ENST00000422068 99 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AL353777.1-201ENST00000425552 326 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 Z74696.2-201ENST00000436514 498 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 MTND6P13-201ENST00000443510 523 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX27Q96L92 KLF3P2-201ENST00000465138 268 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 SNORA70.14-201ENST00000516205 110 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 RNU6-528P-201ENST00000516926 100 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AC022616.6-201ENST00000520479 119 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AP003033.1-201ENST00000527244 415 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AP003122.4-201ENST00000530980 758 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AC123904.2-201ENST00000548059 300 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX27Q96L92 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.21□□□□□ -1.74
SNX27Q96L92 HMGN1P30-201ENST00000589286 268 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 RPL12P50-201ENST00000603116 116 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC006023.1-201ENST00000603944 259 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC090578.1-201ENST00000604955 591 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 NDUFA8P1-201ENST00000605525 367 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC012603.1-201ENST00000606424 528 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC098614.4-201ENST00000607601 462 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AL355472.4-201ENST00000610233 626 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC005332.10-201ENST00000612725 619 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX27Q96L92 MIR8057-201ENST00000620957 69 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 AC012150.2-201ENST00000621300 544 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 MIR7843-201ENST00000622274 79 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
SNX27Q96L92 EXOC5P1-201ENST00000510543 1969 ntBASIC4.21□□□□□ -1.74
SNX27Q96L92 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms