Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RPL12P25-201ENST00000455592 494 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AC015911.1-201ENST00000495111 156 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AC022493.2-201ENST00000506122 481 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CALR3Q96L12 SCARNA15.2-201ENST00000516409 127 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 RN7SKP183-201ENST00000517169 324 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 TRIM77BP-201ENST00000524985 1119 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AL157871.3-201ENST00000557231 293 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AC084783.1-201ENST00000565846 910 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 TVP23CP2-201ENST00000571473 623 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AP005403.1-201ENST00000579720 229 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AL161798.1-201ENST00000604630 131 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.69□□□□□ -1.5
CALR3Q96L12 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AC023421.1-201ENST00000590535 1785 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CALR3Q96L12 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AC099654.2-201ENST00000433031 1980 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CALR3Q96L12 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CALR3Q96L12 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CALR3Q96L12 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 AL138820.1-201ENST00000617901 5305 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.68□□□□□ -1.5
CALR3Q96L12 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.68□□□□□ -1.5
CALR3Q96L12 Y_RNA.324-201ENST00000365165 102 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 RNU6-395P-201ENST00000365662 106 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 Y_RNA.428-201ENST00000384078 102 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CALR3Q96L12 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.68□□□□□ -1.5
CALR3Q96L12 RPL23AP50-201ENST00000434149 455 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 CYCSP6-201ENST00000434498 302 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.68□□□□□ -1.5
CALR3Q96L12 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.68□□□□□ -1.5
CALR3Q96L12 RPS24P13-201ENST00000442520 397 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 RANP8-201ENST00000444720 713 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 GAPDHP25-201ENST00000447061 1001 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 RPS24P6-201ENST00000452670 400 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.68□□□□□ -1.5
CALR3Q96L12 RPL23AP31-201ENST00000456160 467 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 RNA5SP103-201ENST00000459503 118 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AC022493.1-201ENST00000492984 337 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AL117692.1-201ENST00000494283 713 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.68□□□□□ -1.5
CALR3Q96L12 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.68□□□□□ -1.5
CALR3Q96L12 AL359273.1-201ENST00000510918 627 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 RN7SKP276-201ENST00000516242 268 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 SNORA43.3-201ENST00000517240 103 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.68□□□□□ -1.5
CALR3Q96L12 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.68□□□□□ -1.5
CALR3Q96L12 AC005014.2-201ENST00000607795 599 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AC131238.1-201ENST00000617135 328 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AL162373.1-201ENST00000620433 407 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.68□□□□□ -1.5
CALR3Q96L12 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 OR51H2P-202ENST00000641424 3046 ntBASIC5.68□□□□□ -1.5
CALR3Q96L12 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CALR3Q96L12 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.68□□□□□ -1.5
CALR3Q96L12 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CALR3Q96L12 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CALR3Q96L12 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CALR3Q96L12 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CALR3Q96L12 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CALR3Q96L12 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CALR3Q96L12 Y_RNA.151-201ENST00000363566 112 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 RNU6-1059P-201ENST00000363752 98 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 RNU6-1181P-201ENST00000384191 106 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 RNU6-574P-201ENST00000384265 107 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 SNORA41-201ENST00000384675 132 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 SNORD73A-201ENST00000386062 65 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.67□□□□□ -1.5
CALR3Q96L12 AF186996.5-201ENST00000418098 904 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 AC091390.3-201ENST00000426478 338 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 RSL24D1P6-201ENST00000426934 401 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.67□□□□□ -1.5
CALR3Q96L12 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.67□□□□□ -1.5
CALR3Q96L12 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.67□□□□□ -1.5
CALR3Q96L12 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 PCMTD1P1-201ENST00000455560 355 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 DHFRP3-201ENST00000455595 559 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC245028.2-201ENST00000458673 253 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 RN7SL814P-201ENST00000487715 300 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 RPS4XP20-201ENST00000505751 772 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 RNU6-264P-201ENST00000517134 104 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms