Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC098483.2-201ENST00000603158 454 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USP47Q96K76 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.07□□□□□ -1.92
USP47Q96K76 AL121594.5-201ENST00000631724 573 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 AC130650.2-201ENST00000618736 2403 ntBASIC3.07□□□□□ -1.92
USP47Q96K76 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.07□□□□□ -1.92
USP47Q96K76 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP47Q96K76 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP47Q96K76 RNU6-76P-201ENST00000384060 104 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 U6.112-201ENST00000384129 70 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.06□□□□□ -1.92
USP47Q96K76 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.06□□□□□ -1.92
USP47Q96K76 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.06□□□□□ -1.92
USP47Q96K76 NDUFA5P7-201ENST00000452914 242 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 AC012181.1-201ENST00000479895 423 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 MTCYBP37-201ENST00000510642 1133 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.06□□□□□ -1.92
USP47Q96K76 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.06□□□□□ -1.92
USP47Q96K76 AP000790.1-201ENST00000528891 737 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.06□□□□□ -1.92
USP47Q96K76 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP47Q96K76 GAS5-AS1-201ENST00000602767 694 ntBASIC3.06□□□□□ -1.92
USP47Q96K76 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP47Q96K76 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.05□□□□□ -1.92
USP47Q96K76 MTCO1P4-201ENST00000520516 1409 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
USP47Q96K76 RNU6-353P-201ENST00000364266 108 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 RNU6-619P-201ENST00000365146 108 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 RNU6-730P-201ENST00000383954 104 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP47Q96K76 RNU6-932P-201ENST00000391108 106 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AL121978.1-201ENST00000402778 359 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 MTCO3P12-201ENST00000416718 547 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.05□□□□□ -1.92
USP47Q96K76 RPS6P14-201ENST00000425165 719 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.05□□□□□ -1.92
USP47Q96K76 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.05□□□□□ -1.92
USP47Q96K76 RABEPKP1-201ENST00000440529 1026 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AC004022.1-201ENST00000447766 1066 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AL034418.1-201ENST00000448675 860 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 SSXP4-201ENST00000451349 245 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 PTGES3P5-201ENST00000455109 434 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 snoU13.4-201ENST00000458916 104 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 RPL32P14-201ENST00000463196 378 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AC008379.1-201ENST00000463655 464 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
USP47Q96K76 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.05□□□□□ -1.92
USP47Q96K76 AC010301.1-201ENST00000473936 355 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 RNU1-61P-201ENST00000516107 151 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.05□□□□□ -1.92
USP47Q96K76 AC124283.4-201ENST00000581815 456 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AC128687.1-201ENST00000605304 619 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.05□□□□□ -1.92
USP47Q96K76 AC104237.2-201ENST00000612456 443 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 AC092650.2-201ENST00000619984 902 ntBASIC3.05□□□□□ -1.92
USP47Q96K76 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP47Q96K76 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP47Q96K76 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.05□□□□□ -1.92
USP47Q96K76 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
USP47Q96K76 AC111188.2-201ENST00000529697 1387 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AL023284.1-201ENST00000403956 276 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.04□□□□□ -1.92
USP47Q96K76 RPL31P54-201ENST00000429803 370 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 ATP5F1P1-201ENST00000433775 569 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AL118520.1-201ENST00000450770 291 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP47Q96K76 RPL7P5-201ENST00000471472 736 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AC068587.2-201ENST00000478386 781 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AC118282.2-201ENST00000508739 374 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 RNA5SP458-201ENST00000516188 119 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 RNA5SP468-201ENST00000516782 93 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AC087272.1-201ENST00000523624 533 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.04□□□□□ -1.92
USP47Q96K76 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.04□□□□□ -1.92
USP47Q96K76 OR4T1P-201ENST00000554933 911 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AL353997.5-201ENST00000618886 171 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 AC018755.4-201ENST00000619715 454 ntBASIC3.04□□□□□ -1.92
USP47Q96K76 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
USP47Q96K76 AC091564.4-201ENST00000533934 2194 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP47Q96K76 RNU6-115P-201ENST00000364310 107 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 RNU6-609P-201ENST00000365459 107 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP47Q96K76 SNORA64-201ENST00000384674 134 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AL023807.1-201ENST00000407932 359 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.03□□□□□ -1.92
USP47Q96K76 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.03□□□□□ -1.92
USP47Q96K76 TAF13P2-201ENST00000416876 286 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC104332.2-201ENST00000429959 156 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.03□□□□□ -1.92
USP47Q96K76 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.03□□□□□ -1.92
USP47Q96K76 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.03□□□□□ -1.92
USP47Q96K76 MOB1AP2-201ENST00000446060 614 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 RPL7P12-201ENST00000446719 750 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AL050341.1-201ENST00000447743 313 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 HMGN2P23-201ENST00000456759 269 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms