Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.87□□□□□ -1.63
SHDQ96IW2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 MTATP6P4-201ENST00000427725 675 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 RPS17P8-201ENST00000434525 335 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 NDUFA5P4-201ENST00000436704 385 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 HMGB3P9-201ENST00000441799 583 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AC104058.1-201ENST00000448028 297 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AL691482.1-201ENST00000453255 87 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 CYCSP34-201ENST00000458172 304 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.87□□□□□ -1.63
SHDQ96IW2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.87□□□□□ -1.63
SHDQ96IW2 MTCO3P9-201ENST00000506989 781 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 CCDC34P1-201ENST00000507441 517 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 HIGD1AP13-201ENST00000509878 289 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.87□□□□□ -1.63
SHDQ96IW2 RNU6-189P-201ENST00000516120 101 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 RNU6-864P-201ENST00000516256 108 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 Y_RNA.689-201ENST00000516589 107 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 SNORA31.22-201ENST00000517204 135 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.87□□□□□ -1.63
SHDQ96IW2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 AL359219.2-201ENST00000555184 348 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AL049839.1-201ENST00000556151 657 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 MIR5583-1-201ENST00000580941 59 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.87□□□□□ -1.63
SHDQ96IW2 AC091979.2-201ENST00000607514 214 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AC009570.1-201ENST00000609599 745 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 U2.17-201ENST00000611454 95 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 uc_338.15-201ENST00000615470 191 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 AC034229.5-201ENST00000624258 185 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 SDAD1P2-201ENST00000441308 2028 ntBASIC4.87□□□□□ -1.63
SHDQ96IW2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.87□□□□□ -1.63
SHDQ96IW2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHDQ96IW2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.87□□□□□ -1.63
SHDQ96IW2 ZFRP1-201ENST00000457579 2970 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC009812.4-201ENST00000569134 1805 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 PRO1804-201ENST00000623780 2050 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 RNU6-335P-201ENST00000364563 113 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 SNORA70.6-201ENST00000383934 134 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 ARL4AP5-201ENST00000404372 599 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC140479.3-201ENST00000418944 1126 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.86□□□□□ -1.63
SHDQ96IW2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AL591704.1-201ENST00000432574 275 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AP000942.1-201ENST00000463969 747 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 RN7SL303P-201ENST00000469773 251 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC091868.1-201ENST00000508746 304 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 AP001781.1-201ENST00000530977 207 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 OR11H5P-201ENST00000554039 926 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AL355836.1-201ENST00000555951 870 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 FAM60BP-201ENST00000578364 658 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.86□□□□□ -1.63
SHDQ96IW2 BNIP3P25-201ENST00000596023 559 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 AC010632.3-201ENST00000611377 369 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.86□□□□□ -1.63
SHDQ96IW2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHDQ96IW2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.86□□□□□ -1.63
SHDQ96IW2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.86□□□□□ -1.63
SHDQ96IW2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHDQ96IW2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.86□□□□□ -1.63
SHDQ96IW2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.86□□□□□ -1.63
SHDQ96IW2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHDQ96IW2 RAD17P1-201ENST00000418130 2042 ntBASIC4.85□□□□□ -1.63
SHDQ96IW2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SHDQ96IW2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHDQ96IW2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHDQ96IW2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHDQ96IW2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SHDQ96IW2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms