Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC97Q96F63 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC97Q96F63 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC97Q96F63 SNORD3E-201ENST00000362899 217 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 RN7SKP124-201ENST00000364730 341 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 PPIAP9-201ENST00000403866 498 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC97Q96F63 RNU2-3P-201ENST00000410144 191 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 RNU6-1025P-201ENST00000410629 104 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC096921.1-201ENST00000411661 375 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 CYCSP33-201ENST00000414485 327 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 AL158156.1-201ENST00000422509 473 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 AL163540.1-201ENST00000485382 386 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC005921.1-201ENST00000510589 286 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC023141.12-201ENST00000512399 199 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 RNA5SP360-201ENST00000516555 118 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 RNA5SP291-201ENST00000517222 105 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 AL352979.3-201ENST00000553515 247 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 MIR4260-201ENST00000583107 67 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 PISRT1.1-201ENST00000616930 107 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC97Q96F63 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC97Q96F63 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CCDC97Q96F63 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC97Q96F63 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC97Q96F63 OR4F13P-202ENST00000560066 2054 ntBASIC5.65□□□□□ -1.51
CCDC97Q96F63 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC97Q96F63 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC008568.2-201ENST00000623862 2313 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC007823.1-201ENST00000569932 1566 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 SNORD62.1-201ENST00000362541 86 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 RNA5SP189-201ENST00000364920 115 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 RNA5SP30-201ENST00000365552 115 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 MIR606-201ENST00000384851 96 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 MIR1286-201ENST00000408112 78 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 Y_RNA.646-201ENST00000410980 101 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 EIF4EP1-201ENST00000422311 642 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 UBE2V1P4-201ENST00000425374 344 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AL645939.1-201ENST00000453429 797 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC091180.1-201ENST00000462104 372 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC022215.1-201ENST00000481770 362 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 RPL31P13-201ENST00000484151 370 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 RN7SL30P-201ENST00000488416 306 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC231760.1-201ENST00000498002 260 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC092436.3-201ENST00000511788 257 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC021146.3-201ENST00000511911 260 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 Y_RNA.708-201ENST00000516950 96 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 RNA5SP230-201ENST00000517039 122 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AP006245.2-201ENST00000522004 300 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 SNRPGP18-201ENST00000553000 214 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 MIR3936-201ENST00000584304 110 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC106900.2-201ENST00000604994 317 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AP000654.2-201ENST00000605633 586 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 AL162730.1-201ENST00000605734 292 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC118658.2-201ENST00000618697 459 ntBASIC5.64□□□□□ -1.51
CCDC97Q96F63 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC97Q96F63 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC97Q96F63 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCDC97Q96F63 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms