Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.87□□□□□ -1.79
CTHRC1Q96CG8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC073343.1-201ENST00000328239 651 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 MIR448-201ENST00000362131 111 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RNA5SP52-201ENST00000362448 134 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RNA5SP388-201ENST00000362584 119 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RNY3P3-201ENST00000363816 102 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RNA5SP513-201ENST00000364648 118 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RNU4-48P-201ENST00000365559 182 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 MIR124-3-201ENST00000384866 87 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 OR51A5P-201ENST00000415429 942 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RPS7P15-201ENST00000415804 584 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 UBE2FP1-201ENST00000416536 447 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC012498.1-201ENST00000424037 437 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 OR2AS1P-201ENST00000427827 319 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC006011.1-201ENST00000442758 349 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AL356010.1-201ENST00000456364 102 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC006512.1-201ENST00000468816 291 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC078785.3-201ENST00000476607 425 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RPS29P25-201ENST00000481709 171 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC068587.1-201ENST00000483613 781 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AF213884.1-201ENST00000488102 463 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 HSPD1P15-201ENST00000505573 1122 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC046134.1-201ENST00000514454 666 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 SNORA40.12-201ENST00000516329 111 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RN7SKP21-201ENST00000516503 220 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 MRPL49P2-201ENST00000521066 465 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 RN7SL600P-201ENST00000581811 299 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 SNORD84-203ENST00000584275 78 ntBASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTHRC1Q96CG8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RNU6-511P-201ENST00000363496 107 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 Y_RNA.160-201ENST00000363677 92 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RNU6-39P-201ENST00000384344 107 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 SNORA70C-201ENST00000384538 135 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AL591416.1-201ENST00000404015 867 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RNU2-39P-201ENST00000410604 198 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RAC1P3-201ENST00000416129 580 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 MTCO3P12-201ENST00000416718 547 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 ATP5JP1-201ENST00000431631 322 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RPS15AP9-201ENST00000439856 381 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AL671855.1-201ENST00000446875 1203 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC126389.1-201ENST00000477436 290 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC018710.1-201ENST00000506509 158 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC098799.2-201ENST00000509466 868 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC105417.1-201ENST00000514691 285 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 RNA5SP401-201ENST00000515920 127 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 HMGB1P41-201ENST00000520234 440 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC126177.3-201ENST00000551839 688 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AL121603.1-201ENST00000553815 142 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms