Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 U4.6-201ENST00000621618 127 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 OR5H6-203ENST00000642105 978 ntBASIC3.34□□□□□ -1.87
VPS33AQ96AX1 AC007785.2-201ENST00000598627 1916 ntBASIC3.34□□□□□ -1.88
VPS33AQ96AX1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS33AQ96AX1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS33AQ96AX1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AL049641.1-201ENST00000441055 1948 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 RNU5A-2P-201ENST00000384337 116 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 MIR19A-201ENST00000384878 82 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC007066.1-201ENST00000392902 381 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 RN7SKP156-201ENST00000410308 342 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 BX890604.2-201ENST00000427883 474 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AP000907.1-201ENST00000428428 510 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 C4BPAP2-201ENST00000428434 478 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AL390023.1-201ENST00000428836 262 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 FTH1P1-201ENST00000437933 532 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 RNU7-59P-201ENST00000459101 61 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 RPL23AP67-201ENST00000465341 474 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC004263.1-201ENST00000479327 332 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 RPS15AP36-201ENST00000492022 382 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 OR2A20P-203ENST00000498397 1268 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 RNU6-1129P-201ENST00000515964 104 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 NRON-201ENST00000517270 370 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AMZ2P1-203ENST00000565833 850 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 HMGB1P6-201ENST00000569046 646 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC008507.1-201ENST00000587506 734 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 TPMTP1-201ENST00000592307 737 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC079089.3-201ENST00000603094 673 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC107294.3-201ENST00000609211 526 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC012150.2-201ENST00000621300 544 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AP003355.3-201ENST00000623465 114 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS33AQ96AX1 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
VPS33AQ96AX1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 RNA5SP252-201ENST00000391131 119 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC012498.1-201ENST00000424037 437 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AL512844.2-201ENST00000433990 593 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 MTCYBP39-201ENST00000437562 491 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 MTND5P2-201ENST00000442927 1142 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 RPL21P8-201ENST00000465083 535 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 RPS20P22-201ENST00000473700 357 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 PRELID3BP5-201ENST00000508612 460 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 RANP9-201ENST00000519957 271 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AP000867.2-201ENST00000532468 320 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 OR8R1P-201ENST00000543943 764 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AF038458.1-201ENST00000588406 262 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC068790.3-201ENST00000602988 553 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC007038.2-201ENST00000608095 740 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC107214.2-201ENST00000608204 634 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 MIR6748-201ENST00000610433 71 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AL356863.1-201ENST00000623378 1080 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC112204.3-201ENST00000623822 332 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 AC007671.2-201ENST00000637344 619 ntBASIC3.32□□□□□ -1.88
VPS33AQ96AX1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS33AQ96AX1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms