Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 BX276092.4-201ENST00000452056 248 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 snoU109.4-201ENST00000458953 143 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 RPL21P99-201ENST00000480369 423 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BRF1Q92994 Y_RNA.665-201ENST00000516177 98 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 RN7SKP116-201ENST00000516902 319 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.03□□□□□ -1.6
BRF1Q92994 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.03□□□□□ -1.6
BRF1Q92994 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.03□□□□□ -1.6
BRF1Q92994 AC103843.2-201ENST00000530523 682 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BRF1Q92994 AC128657.1-201ENST00000549459 145 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 SETP7-201ENST00000552169 453 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AL133153.1-201ENST00000557756 303 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.03□□□□□ -1.6
BRF1Q92994 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.03□□□□□ -1.6
BRF1Q92994 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.03□□□□□ -1.6
BRF1Q92994 AL162730.1-201ENST00000605734 292 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AL161637.1-201ENST00000622380 412 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AC091925.2-201ENST00000625059 256 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
BRF1Q92994 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
BRF1Q92994 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRF1Q92994 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
BRF1Q92994 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.03□□□□□ -1.6
BRF1Q92994 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
BRF1Q92994 AC104118.1-201ENST00000607625 1589 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
BRF1Q92994 AC006971.1-201ENST00000407916 4486 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRF1Q92994 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.02□□□□□ -1.61
BRF1Q92994 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
BRF1Q92994 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
BRF1Q92994 AL158163.1-201ENST00000603915 1649 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 U3.12-201ENST00000364498 214 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRF1Q92994 RNU2-39P-201ENST00000410604 198 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 RPS7P15-201ENST00000415804 584 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 AL451054.2-201ENST00000420896 202 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 HSPE1P1-201ENST00000421494 318 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 RBMY1KP-201ENST00000423480 476 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 AC008065.1-201ENST00000428525 348 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 AL132765.1-201ENST00000434165 553 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 RPL12P46-201ENST00000436610 195 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.02□□□□□ -1.61
BRF1Q92994 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF1Q92994 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.02□□□□□ -1.61
BRF1Q92994 KLHL2P1-201ENST00000508691 521 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 FAM206BP-201ENST00000510179 541 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 MTCO3P44-201ENST00000510977 541 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 TTC39CP1-201ENST00000512513 755 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 AC017037.2-201ENST00000513850 890 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 RNU6-27P-201ENST00000516146 107 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 RN7SKP277-201ENST00000516895 283 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 HMGB1P19-201ENST00000517578 577 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 HMGB1P41-201ENST00000520234 440 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.02□□□□□ -1.61
BRF1Q92994 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF1Q92994 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.02□□□□□ -1.61
BRF1Q92994 AC026464.5-201ENST00000562497 722 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 CYP4A43P-201ENST00000568156 121 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 AC040168.1-201ENST00000623594 991 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.02□□□□□ -1.61
BRF1Q92994 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
BRF1Q92994 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.02□□□□□ -1.61
BRF1Q92994 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRF1Q92994 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
BRF1Q92994 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.02□□□□□ -1.61
BRF1Q92994 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.02□□□□□ -1.61
BRF1Q92994 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF1Q92994 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF1Q92994 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 AL359893.1-201ENST00000447628 1580 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
BRF1Q92994 RNU6-522P-201ENST00000364497 107 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
BRF1Q92994 RPS4XP9-201ENST00000405151 780 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 RNA5SP36-201ENST00000410197 133 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 ARL5AP1-201ENST00000418991 388 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AC068287.1-201ENST00000430283 295 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 ATP5HP2-201ENST00000433885 485 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 RPL36AP6-201ENST00000435770 321 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.01□□□□□ -1.61
BRF1Q92994 AL590639.1-201ENST00000456484 337 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 RPS29P15-201ENST00000458329 171 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 SNORD19B-201ENST00000459623 84 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 RN7SL691P-201ENST00000494487 301 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AC092436.1-201ENST00000506450 503 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 RN7SKP13-201ENST00000515933 244 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 CDH12P4-201ENST00000517835 295 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 CDH12P3-201ENST00000517935 295 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 CDH12P1-201ENST00000518435 295 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 NARSP2-201ENST00000518524 679 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.01□□□□□ -1.61
BRF1Q92994 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms