Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNY3P13-201ENST00000365542 102 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 RHOT1P2-201ENST00000366423 333 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 RNU6-1181P-201ENST00000384191 106 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 MIR93-201ENST00000385024 80 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC127391.1-201ENST00000411737 98 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 MTND3P17-201ENST00000416968 344 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 HSPD1P21-201ENST00000436541 245 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 ARPC3P1-201ENST00000437218 533 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC004866.2-201ENST00000438285 481 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 RPS3AP12-201ENST00000443616 753 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL451050.1-201ENST00000450126 415 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 MTCO2P29-201ENST00000465212 189 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 RBM43P1-201ENST00000476891 1081 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 KLHL2P1-201ENST00000508691 521 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC005921.1-201ENST00000510589 286 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 MYL12AP1-201ENST00000518490 515 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 HMGN1P28-201ENST00000521340 364 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC007991.1-201ENST00000522680 631 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC022968.1-201ENST00000567372 442 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC010546.1-201ENST00000569391 485 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 DEFB131E-202ENST00000602581 683 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC068790.5-201ENST00000602741 355 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC245014.2-201ENST00000603689 287 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC246785.4-201ENST00000605374 287 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 U3.45-201ENST00000607547 219 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL590282.1-201ENST00000610379 1136 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL133173.2-201ENST00000614270 90 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL591424.2-201ENST00000617023 128 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AC136475.10-201ENST00000620253 385 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 AL360181.4-201ENST00000621752 134 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 MTCO1P12-201ENST00000414273 1543 ntBASIC3.89□□□□□ -1.79
HMGB4Q8WW32 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 SNORD74.4-201ENST00000364129 80 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RN7SKP226-201ENST00000364912 300 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RPL7P60-201ENST00000397636 735 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL109755.1-201ENST00000401791 649 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RNA5SP239-201ENST00000410218 129 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AF274854.1-201ENST00000413236 615 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RPS15AP12-201ENST00000419498 388 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 PIGFP2-201ENST00000421400 651 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 PPP1R11P2-201ENST00000423543 382 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 DUTP6-201ENST00000425573 462 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC119618.1-201ENST00000434191 222 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC093156.1-201ENST00000440382 670 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 USP9YP15-201ENST00000442391 422 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC079448.1-201ENST00000449377 373 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL359385.1-201ENST00000456509 365 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC006517.1-201ENST00000480485 328 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RPL31P13-201ENST00000484151 370 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 Vault.3-201ENST00000516676 95 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RNA5SP337-201ENST00000517007 109 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL391840.1-201ENST00000571144 367 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 FAM60BP-201ENST00000578364 658 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms